RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TEX49A0A1B0GTD5 131 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 A0A1W2PQD3 144 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 NDUFA3O95167 84 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 ARMS2P0C7Q2 107 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 PYYP10082 97 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 IGLV3-21P80748 117 aaPredicted RBP1.9□□□□□ -2.11
UBXN4-208ENST00000490163 VMA21Q3ZAQ7 101 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 Q5XG85 94 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 ZNF329Q86UD4 541 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 RPS19BP1Q86WX3 136 aaKnown RBP1.9□□□□□ -2.11
UBXN4-208ENST00000490163 NDUFA11Q86Y39 141 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 SLC25A29Q8N8R3 303 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 WFDC11Q8NEX6 87 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 C10orf105Q8TEF2 133 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 PLEKHB2Q96CS7 222 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 DEFB126Q9BYW3 111 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 AGPAT4-IT1Q9H0P7 198 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 KNL1Q8NG31 2342 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 PI4KAP42356 2102 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV41A0A0B4J266 112 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV1-69DA0A0B4J2H0 117 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 C17orf98A8MV24 154 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 H3BT86 120 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 COX6CP09669 75 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 LINC00596Q86U02 117 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 HES7Q9BYE0 225 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 HHLA3Q9XRX5 114 aa1.9□□□□□ -2.11
UBXN4-208ENST00000490163 PRUNE2Q8WUY3 3088 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 C19orf71A6NCJ1 209 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 CLPSP04118 112 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-30-3P0DP02 117 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 C15orf32Q32M92 178 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 C10orf113Q5VZT2 155 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 METTL26Q96S19 204 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 C8orf17Q9NRJ1 99 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 KIAA0100Q14667 2235 aaKnown RBP1.89□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV12-2A0A075B6T6 113 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-43A0A0B4J1X8 118 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 INS-IGF2F8WCM5 200 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 P0DMU3 169 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 FAM231AP0DMU4 169 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 FAM231CP0DMU5 169 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 CXCL5P42830 114 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 CCL8P80075 99 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 EBI3Q14213 229 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 PRNTQ86SH4 94 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 SERP2Q8N6R1 65 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 DYNLRB1Q9NP97 96 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 RPUSD1Q9UJJ7 312 aaKnown RBP1.89□□□□□ -2.11
UBXN4-208ENST00000490163 IGLV3-12A0A075B6K2 115 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV5-51A0A0C4DH38 117 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 NDUFC2-KCTD14E9PQ53 114 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 F8VRH5 84 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 M0R3E3 92 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 LYZL6O75951 148 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 DEFB110Q30KQ9 67 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 MRPL51Q4U2R6 128 aaKnown RBP1.89□□□□□ -2.11
UBXN4-208ENST00000490163 Q86TA4 180 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 CHCHD7Q9BUK0 85 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 OTORQ9NRC9 128 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 SERP1Q9Y6X1 66 aa1.89□□□□□ -2.11
UBXN4-208ENST00000490163 ZGRF1Q86YA3 2104 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 DSCAML1Q8TD84 2053 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 CDH23Q9H251 3354 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 SMIM26A0A096LP01 95 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.88□□□□□ -2.11
UBXN4-208ENST00000490163 TMEM30CPA0ZSE6 113 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 KNCNA6PVL3 124 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 SLC25A16P16260 332 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 CRYGSP22914 178 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 TMEM243Q9BU79 118 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 PRR14LQ5THK1 2151 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 MKI67P46013 3256 aaKnown RBP1.88□□□□□ -2.11
UBXN4-208ENST00000490163 IGKV3D-11A0A0A0MRZ8 115 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 A0A0B4J2C4 111 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 TCRAP04437 139 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
UBXN4-208ENST00000490163 LINC00322Q6ZN03 302 aaPredicted RBP1.88□□□□□ -2.11
UBXN4-208ENST00000490163 Q8N8P6 123 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 FAM167A-AS1Q96KT0 104 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 ZNF714Q96N38 554 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 ZNF580Q9UK33 172 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 U3KQK5 164 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 NACAE9PAV3 2078 aa1.88□□□□□ -2.11
UBXN4-208ENST00000490163 SZT2Q5T011 3432 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 A0A1W2PNU3 283 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-208ENST00000490163 IGHV3-33P01772 117 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-208ENST00000490163 ZNF32P17041 273 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 PMAIP1Q13794 54 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 C10orf128Q5T292 105 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 MRPL55Q7Z7F7 128 aaKnown RBP1.87□□□□□ -2.11
UBXN4-208ENST00000490163 LINC00311Q8N616 119 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 DPH3P1Q9H4G8 78 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 ARFGEF3Q5TH69 2177 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 POLEQ07864 2286 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 A0A1B0GW54 56 aa1.87□□□□□ -2.11
UBXN4-208ENST00000490163 LGALS3P17931 250 aaKnown RBP1.87□□□□□ -2.11
UBXN4-208ENST00000490163 PSMB8P28062 276 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms