RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 BIN3Q9NQY0 253 aa4.72□□□□□ -1.65
COL9A1-209ENST00000489861 IGHV3-73A0A0B4J1V6 119 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 IGKV3D-20A0A0C4DH25 116 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 LOC100131303A0A0U1RQF7 123 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 XKRY2A2RUG3 117 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 KRBOX1C9JBD0 128 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 H3BVH4 76 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 LECT2O14960 151 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 SH2D1AO60880 128 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 IFNA1P01562 189 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 ARMS2P0C7Q2 107 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 TAGLN2P37802 199 aaKnown RBP4.71□□□□□ -1.66
COL9A1-209ENST00000489861 SMIM12Q96EX1 92 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 LINC00479Q96M42 142 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 CYTL1Q9NRR1 136 aa4.71□□□□□ -1.66
COL9A1-209ENST00000489861 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 RBFOX3A6NFN3 312 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 M0R036 132 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 PAGE4O60829 102 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 SMIM17P0DL12 118 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 KRTAP10-8P60410 259 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 RPS20P60866 119 aaKnown RBP4.7□□□□□ -1.66
COL9A1-209ENST00000489861 GAGE1Q13065 139 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 GAGE4Q13068 117 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 GAGE5Q13069 117 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 GAGE13Q4V321 117 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 FAM74A4Q5TZK3 123 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 BAGE2Q86Y30 109 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 ZC2HC1AQ96GY0 325 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 SFRP2Q96HF1 295 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 C1orf43Q9BWL3 253 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
COL9A1-209ENST00000489861 TRBV7-3A0A075B6L6 115 aa4.69□□□□□ -1.66
COL9A1-209ENST00000489861 IGKV2D-24A0A075B6R9 120 aa4.69□□□□□ -1.66
COL9A1-209ENST00000489861 M0R381 172 aa4.69□□□□□ -1.66
COL9A1-209ENST00000489861 PDE6DO43924 150 aa4.69□□□□□ -1.66
COL9A1-209ENST00000489861 RAB4BP61018 213 aa4.69□□□□□ -1.66
COL9A1-209ENST00000489861 SPANXN1Q5VSR9 72 aa4.69□□□□□ -1.66
COL9A1-209ENST00000489861 TRAV1-1A0A0B4J248 108 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 G3V3Q6 166 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 H7C1H1 209 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 OR5AL1P0C617 328 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 ZNF56Q15929 161 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 UFSP1Q6NVU6 142 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 TMUB2Q71RG4 321 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 NIT1Q86X76 327 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 UBE2WQ96B02 151 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 AP1S3Q96PC3 154 aa4.68□□□□□ -1.66
COL9A1-209ENST00000489861 TMSB15BA0A087X1C1 80 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 A0A0J9YXV3 536 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 GRIFINA4D1Z8 144 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 TMEM262E9PQX1 116 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 F2Z2F3 143 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 SMLR1H3BR10 107 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 CRIP1P50238 77 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 CACNG7P62955 275 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 MIAQ16674 131 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 DAZ4Q86SG3 579 aaKnown RBP4.67□□□□□ -1.66
COL9A1-209ENST00000489861 OR10G8Q8NGN5 311 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 DPH3P1Q9H4G8 78 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 DAZ3Q9NR90 486 aaKnown RBP4.67□□□□□ -1.66
COL9A1-209ENST00000489861 GNG13Q9P2W3 67 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 KLK12Q9UKR0 248 aa4.67□□□□□ -1.66
COL9A1-209ENST00000489861 A0A087WWL8 130 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 F5H697 171 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 SNAI2O43623 268 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 TRGC1P0CF51 173 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 RPL35P42766 123 aaKnown RBP4.66□□□□□ -1.66
COL9A1-209ENST00000489861 GNG4P50150 75 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 SULT1A2P50226 295 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 ANKRD39Q53RE8 183 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 PRR27Q6MZM9 219 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 ATRAIDQ6UW56 229 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 SLC51BQ86UW2 128 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 TCTE3Q8IZS6 198 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 C14orf178Q8N769 122 aaPredicted RBP4.66□□□□□ -1.66
COL9A1-209ENST00000489861 C11orf52Q96A22 123 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 DNAJC30Q96LL9 226 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 MLST8Q9BVC4 326 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 SSBP4Q9BWG4 385 aaPredicted RBP4.66□□□□□ -1.66
COL9A1-209ENST00000489861 PKIGQ9Y2B9 76 aa4.66□□□□□ -1.66
COL9A1-209ENST00000489861 TRBV25-1A0A075B6N4 114 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 TRBV6-8A0A0A6YYG3 113 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 A0A1B0GV50 99 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 P01737 135 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 UBE2D3P61077 147 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 UBE2D2P62837 147 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 CCL20P78556 96 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 RPL19P84098 196 aaKnown RBP4.65□□□□□ -1.67
COL9A1-209ENST00000489861 MEF2BQ02080 365 aaPredicted RBP4.65□□□□□ -1.67
COL9A1-209ENST00000489861 DGAT2L7PQ6IED9 249 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 SMIM15Q7Z3B0 74 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 CLRN3Q8NCR9 226 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 BAALCQ8WXS3 180 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 SAMD10Q9BYL1 202 aa4.65□□□□□ -1.67
COL9A1-209ENST00000489861 AP5S1Q9NUS5 200 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms