RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SNRPEP62304 92 aaKnown RBP10.06□□□□□ -0.8
VPS26A-205ENST00000489656 RPL32P62910 135 aaKnown RBP10.06□□□□□ -0.8
VPS26A-205ENST00000489656 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
VPS26A-205ENST00000489656 TENM3Q9P273 2699 aa10.05□□□□□ -0.8
VPS26A-205ENST00000489656 SERF1AO75920 110 aa10.05□□□□□ -0.8
VPS26A-205ENST00000489656 SPART-AS1P0CW21 52 aa10.05□□□□□ -0.8
VPS26A-205ENST00000489656 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
VPS26A-205ENST00000489656 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
VPS26A-205ENST00000489656 URB1-AS1Q96HZ7 61 aa10.05□□□□□ -0.8
VPS26A-205ENST00000489656 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 LINC01546A6NGU7 62 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 DEFB4AO15263 64 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
VPS26A-205ENST00000489656 Q6ZSN1 163 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 NIT1Q86X76 327 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 MRAPQ8TCY5 172 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 NXT2Q9NPJ8 142 aaKnown RBP10.04□□□□□ -0.8
VPS26A-205ENST00000489656 NIT2Q9NQR4 276 aa10.04□□□□□ -0.8
VPS26A-205ENST00000489656 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 HIST3H2BBQ8N257 126 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 Q8N8P6 123 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 SMIM2Q9BVW6 85 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 ST20Q9HBF5 79 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 CELA1Q9UNI1 258 aa10.03□□□□□ -0.8
VPS26A-205ENST00000489656 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 TRBV6-4A0A1B0GX49 114 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 NUPR1O60356 82 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 LINC00614P0C842 121 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 PMCHP20382 165 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 IFI27P40305 119 aaPredicted RBP10.02□□□□□ -0.81
VPS26A-205ENST00000489656 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
VPS26A-205ENST00000489656 DAD1P61803 113 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 FHL2Q14192 279 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
VPS26A-205ENST00000489656 LOC389332A0A1B0GUA5 103 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 K7EMI3 77 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 K7EQD1 137 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 RNASEKQ6P5S7 137 aaKnown RBP10.01□□□□□ -0.81
VPS26A-205ENST00000489656 FA2HQ7L5A8 372 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 NEXN-AS1Q8NBZ9 246 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
VPS26A-205ENST00000489656 TMEM70Q9BUB7 260 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
VPS26A-205ENST00000489656 TRGV4A0A0C4DH28 118 aa10□□□□□ -0.81
VPS26A-205ENST00000489656 TRBV27A0A0K0K1C4 114 aa10□□□□□ -0.81
VPS26A-205ENST00000489656 SDHAF1A6NFY7 115 aa10□□□□□ -0.81
VPS26A-205ENST00000489656 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
VPS26A-205ENST00000489656 ZMAT4Q9H898 229 aa10□□□□□ -0.81
VPS26A-205ENST00000489656 VCYO14598 125 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 HSBP1O75506 76 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 ATP5G1P05496 136 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 P0DMU3 169 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 FAM231AP0DMU4 169 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 FAM231CP0DMU5 169 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 RHOHQ15669 191 aa9.99□□□□□ -0.81
VPS26A-205ENST00000489656 A0A0J9YWU9 116 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 LOC105371267A0A1B0GV96 52 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 S100A2P29034 98 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
VPS26A-205ENST00000489656 PRKDCP78527 4128 aaKnown RBP9.97□□□□□ -0.81
VPS26A-205ENST00000489656 TCAPO15273 167 aa9.97□□□□□ -0.81
VPS26A-205ENST00000489656 PDZD11Q5EBL8 140 aa9.97□□□□□ -0.81
VPS26A-205ENST00000489656 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
VPS26A-205ENST00000489656 Q9UF83 564 aa9.97□□□□□ -0.81
VPS26A-205ENST00000489656 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
VPS26A-205ENST00000489656 HHLA3Q9XRX5 114 aa9.97□□□□□ -0.81
VPS26A-205ENST00000489656 COL7A1Q02388 2944 aa9.96□□□□□ -0.81
VPS26A-205ENST00000489656 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 LINC00694P0DN24 101 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 AMTP48728 403 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 CRYBA4P53673 196 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 RPL36AP83881 106 aaKnown RBP9.96□□□□□ -0.82
VPS26A-205ENST00000489656 LAGE3Q14657 143 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 ORMDL2Q53FV1 153 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 RPL36ALQ969Q0 106 aaKnown RBP9.96□□□□□ -0.82
VPS26A-205ENST00000489656 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.82
VPS26A-205ENST00000489656 I3L3M4 83 aa9.95□□□□□ -0.82
VPS26A-205ENST00000489656 NHLRC4P0CG21 123 aaPredicted RBP9.95□□□□□ -0.82
VPS26A-205ENST00000489656 UBE2D3P61077 147 aa9.95□□□□□ -0.82
VPS26A-205ENST00000489656 UBE2D2P62837 147 aa9.95□□□□□ -0.82
VPS26A-205ENST00000489656 FAM19A2Q8N3H0 131 aa9.95□□□□□ -0.82
VPS26A-205ENST00000489656 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
VPS26A-205ENST00000489656 A0A096LNJ9 63 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 TSHBP01222 138 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 HBDP02042 147 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 FCER1GP30273 86 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 DEFA6Q01524 100 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 DAZ4Q86SG3 579 aaKnown RBP9.94□□□□□ -0.82
VPS26A-205ENST00000489656 ZNRF2Q8NHG8 242 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 C11orf45Q8TAV5 145 aa9.94□□□□□ -0.82
VPS26A-205ENST00000489656 DAZ3Q9NR90 486 aaKnown RBP9.94□□□□□ -0.82
VPS26A-205ENST00000489656 FABP4P15090 132 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms