RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 NHLRC2Q8NBF2 726 aa5.71□□□□□ -1.5
TRAPPC12-221ENST00000489032 TMEM263Q8WUH6 116 aaKnown RBP5.71□□□□□ -1.5
TRAPPC12-221ENST00000489032 RNASE7Q9H1E1 156 aaKnown RBP5.71□□□□□ -1.5
TRAPPC12-221ENST00000489032 NAT8BQ9UHF3 227 aa5.71□□□□□ -1.5
TRAPPC12-221ENST00000489032 TRAPPC1Q9Y5R8 145 aa5.71□□□□□ -1.5
TRAPPC12-221ENST00000489032 IGHV1OR15-1A0A075B7D0 117 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 FAM231BA6NCW3 169 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 C5orf52A6NGY3 159 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 LYRM9A8MSI8 78 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 MT-ND6P03923 174 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 TSKUQ8WUA8 353 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 GFRA4Q9GZZ7 299 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 RPP21Q9H633 154 aaKnown RBP5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 NAGKQ9UJ70 344 aa5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 TIMM8BQ9Y5J9 83 aaPredicted RBP5.7□□□□□ -1.5
TRAPPC12-221ENST00000489032 XKRY2A2RUG3 117 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 C19orf71A6NCJ1 209 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BKO60814 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 ZNF324O75467 553 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BJP06899 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 TRGC1P0CF51 173 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BOP23527 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BBP33778 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 NDUFA6P56556 154 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BDP58876 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BCP62807 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST2H2BEQ16778 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 PRR9Q5T870 116 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 Q6AWC8 147 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BHQ93079 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 KCNS1Q96KK3 526 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BNQ99877 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIST1H2BMQ99879 126 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 LINC00467Q9BRT7 94 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 GNB1LQ9BYB4 327 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 KLK5Q9Y337 293 aaPredicted RBP5.69□□□□□ -1.5
TRAPPC12-221ENST00000489032 A0A087WYN8 130 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 FABP5P3A8MUU1 101 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 PRM2P04554 102 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 S100A8P05109 93 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 AZU1P20160 251 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 AKR1D1P51857 326 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 RPS20P60866 119 aaKnown RBP5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 DAD1P61803 113 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 FABP9Q0Z7S8 132 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 MUC21Q5SSG8 566 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 FAM222AQ5U5X8 452 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 COX8CQ7Z4L0 72 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 ATP5L2Q7Z4Y8 100 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 RNASE8Q8TDE3 154 aaKnown RBP5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 FRZBQ92765 325 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 Q9H8V8 135 aa5.68□□□□□ -1.5
TRAPPC12-221ENST00000489032 IGHV4-4A0A075B6R2 117 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 TRAV10A0A0B4J240 114 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 PHOX2AO14813 284 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 DEFB130BP0DP73 79 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 DEFB130AP0DP74 79 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 MT3P25713 68 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 TCL1AP56279 114 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 RAB4BP61018 213 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 DAZ2Q13117 558 aaKnown RBP5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 FAM162BQ5T6X4 162 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 CEMP1Q6PRD7 247 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 OR2D3Q8NGH3 330 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 BORCS7Q96B45 105 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 ZC2HC1AQ96GY0 325 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 NOP10Q9NPE3 64 aaKnown RBP5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 CELA1Q9UNI1 258 aa5.67□□□□□ -1.5
TRAPPC12-221ENST00000489032 A0A1B0GW15 77 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 HIGD1CA8MV81 97 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 CDK2AP2O75956 126 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 ORM1P02763 201 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 S100A2P29034 98 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 C12orf74Q32Q52 190 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 TDRG1Q3Y452 100 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 COA6Q5JTJ3 125 aaKnown RBP5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 NUP35Q8NFH5 326 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 SPXQ9BT56 116 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
TRAPPC12-221ENST00000489032 TRGV2A0A075B6R0 118 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 TRGV1A0A0A0MS02 117 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 PLAC8L1A1L4L8 177 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 APCSP02743 223 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 ATP5G1P05496 136 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 HTN3P15516 51 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 S100A4P26447 101 aaKnown RBP5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 ZNF80P51504 273 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 FOXA3P55318 350 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 HBBP68871 147 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 RIGQ13278 110 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 LGALS9BQ3B8N2 356 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 MRPL54Q6P161 138 aaKnown RBP5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 Q6ZQT7 251 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 TMEM136Q6ZRR5 245 aa5.65□□□□□ -1.5
TRAPPC12-221ENST00000489032 SCRT2Q9NQ03 307 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms