RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 DERL1Q9BUN8 251 aa4.11□□□□□ -1.75
PTCH1-211ENST00000488809 ACTR3CQ9C0K3 210 aaPredicted RBP4.11□□□□□ -1.75
PTCH1-211ENST00000488809 TRBV6-1A0A0K0K1D8 114 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 A0A0U1RQV1 116 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 F5H697 171 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 SH2D1AO60880 128 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 NDUFS6O75380 124 aaKnown RBP4.1□□□□□ -1.75
PTCH1-211ENST00000488809 IQCJQ1A5X6 159 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 MAJINQ3KP22 176 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 LINC01559Q495D7 138 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 PRR27Q6MZM9 219 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 KRTAP26-1Q6PEX3 210 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 FMC1Q96HJ9 113 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 ZNF471Q9BX82 626 aaPredicted RBP4.1□□□□□ -1.75
PTCH1-211ENST00000488809 LINC00474Q9P2X8 69 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 VAX2Q9UIW0 290 aa4.1□□□□□ -1.75
PTCH1-211ENST00000488809 TMSB15BA0A087X1C1 80 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 IGKV2-24A0A0C4DH68 120 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 A0A1B0GUV1 79 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 H7C1H1 209 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 SSNA1O43805 119 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 RPS10P46783 165 aaKnown RBP4.09□□□□□ -1.75
PTCH1-211ENST00000488809 H2BFSP57053 126 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 KRTAP10-8P60410 259 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 COX6A2Q02221 97 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 ZNF674Q2M3X9 581 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 SPANXN1Q5VSR9 72 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 COX8CQ7Z4L0 72 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 STPG4Q8N801 248 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 WFDC1Q9HC57 220 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 TNFSF18Q9UNG2 199 aa4.09□□□□□ -1.75
PTCH1-211ENST00000488809 FAM231BA6NCW3 169 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 INMT-MINDY4F8WBC2 141 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 UBE2L6O14933 153 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 CXCL1P09341 107 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 ATP6V0CP27449 155 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 SULT1A2P50226 295 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 CRIP1P50238 77 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 UBE2G2P60604 165 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 Q6ZRP5 223 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 NTM-AS1Q6ZSK4 140 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 LYPD6BQ8NI32 183 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 AP1S3Q96PC3 154 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 AQP10Q96PS8 301 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 TCEAL7Q9BRU2 100 aa4.08□□□□□ -1.76
PTCH1-211ENST00000488809 CTXND1A0A1B0GTU2 59 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 FAM74A7A6NL05 159 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 RAB5CP51148 216 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 OR10AG1Q8NH19 301 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 STOML3Q8TAV4 291 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 S100ZQ8WXG8 99 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 TMEM243Q9BU79 118 aa4.07□□□□□ -1.76
PTCH1-211ENST00000488809 SNAI2O43623 268 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 LTAP01374 205 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 SLPIP03973 132 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 S100A9P06702 114 aaKnown RBP4.06□□□□□ -1.76
PTCH1-211ENST00000488809 OR5AL1P0C617 328 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 AKR1C3P42330 323 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 LINC00299Q6ZSB3 139 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 ZNF664Q8N3J9 261 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 C15orf56Q8N910 161 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 PRSS3P2Q8NHM4 247 aa4.06□□□□□ -1.76
PTCH1-211ENST00000488809 IGLV4-60A0A075B6I1 120 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 BORCS7-ASMTA0A0B4J1R7 106 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 TRAV26-2A0A0B4J265 109 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 GAGE12HA6NDE8 117 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 MGPP08493 103 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 FHITP49789 147 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 HIGD2BQ4VC39 106 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 AKR1C8PQ5T2L2 129 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 PGLYRP4Q96LB8 373 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 MARVELD1Q9BSK0 173 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 SSBP4Q9BWG4 385 aaPredicted RBP4.05□□□□□ -1.76
PTCH1-211ENST00000488809 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 LPAP08519 4548 aa4.05□□□□□ -1.76
PTCH1-211ENST00000488809 A0A096LNI7 61 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 GVQW2A0A096LPI5 108 aaPredicted RBP4.04□□□□□ -1.76
PTCH1-211ENST00000488809 IGKV3OR2-268A0A0C4DH90 116 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 UPK1BO75841 260 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 AMTP48728 403 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 SSTP61278 116 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 SRSF9Q13242 221 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTCH1-211ENST00000488809 COTL1Q14019 142 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 CST9LP1Q5W188 147 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 KRTAP9-2Q9BYQ4 174 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 MED28Q9H204 178 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 PSORS1C2Q9UIG4 136 aa4.04□□□□□ -1.76
PTCH1-211ENST00000488809 MUC21A0A0G2JKD1 596 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 MUC21A0A140T8X8 626 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 MAP1LC3B2A6NCE7 125 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 M0QY20 66 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 PFDN1O60925 122 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 NKX2-5P52952 324 aaPredicted RBP4.03□□□□□ -1.76
PTCH1-211ENST00000488809 DEFA1P59665 94 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 DEFA3P59666 94 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 CACNG7P62955 275 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 ZNF726P1Q15940 193 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 AMMECR1LQ6DCA0 310 aa4.03□□□□□ -1.76
PTCH1-211ENST00000488809 SUMO4Q6EEV6 95 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms