RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 SCGB1D4Q6XE38 83 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 SH2D6Q7Z4S9 175 aa9.38□□□□□ -0.91
CLIC4-202ENST00000488683 IGHV3-16A0A0C4DH30 117 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 K7EQG2 157 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 ZNRF2Q8NHG8 242 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 TRBV7-3A0A075B6L6 115 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 TEX48A0A1B0GUV7 120 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 HIST2H2BCQ6DN03 193 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 C9orf85Q96MD7 179 aa9.37□□□□□ -0.91
CLIC4-202ENST00000488683 ZNF479Q96JC4 524 aa9.36□□□□□ -0.91
CLIC4-202ENST00000488683 APOMO95445 188 aa9.36□□□□□ -0.91
CLIC4-202ENST00000488683 ZNF876PQ49A33 203 aa9.36□□□□□ -0.91
CLIC4-202ENST00000488683 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
CLIC4-202ENST00000488683 PPP1R17O96001 155 aa9.35□□□□□ -0.91
CLIC4-202ENST00000488683 DSCR9P59020 149 aa9.35□□□□□ -0.91
CLIC4-202ENST00000488683 TCTEX1D4Q5JR98 221 aa9.35□□□□□ -0.91
CLIC4-202ENST00000488683 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
CLIC4-202ENST00000488683 ZNF702PQ9H963 129 aa9.35□□□□□ -0.91
CLIC4-202ENST00000488683 ITPR2Q14571 2701 aa9.35□□□□□ -0.91
CLIC4-202ENST00000488683 ADARB2-AS1A8MUL3 147 aa9.34□□□□□ -0.91
CLIC4-202ENST00000488683 E9PLD3 99 aa9.34□□□□□ -0.91
CLIC4-202ENST00000488683 DEFB131AP59861 70 aa9.34□□□□□ -0.91
CLIC4-202ENST00000488683 VPREB3Q9UKI3 123 aa9.34□□□□□ -0.91
CLIC4-202ENST00000488683 INSL3P51460 131 aa9.34□□□□□ -0.91
CLIC4-202ENST00000488683 SRSF9Q13242 221 aaKnown RBP eCLIP9.34□□□□□ -0.91
CLIC4-202ENST00000488683 LGALS9O00182 355 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 COX6B1P14854 86 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 KIR2DL4Q99706 377 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 IGHV1OR15-1A0A075B7D0 117 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 M0QY20 66 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 RPL32P62910 135 aaKnown RBP9.33□□□□□ -0.92
CLIC4-202ENST00000488683 TAL2Q16559 108 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 SAMD13Q5VXD3 122 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 ODF3Q96PU9 254 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 A0A1W2PRX2 142 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
CLIC4-202ENST00000488683 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
CLIC4-202ENST00000488683 LINC01549A6NIU2 74 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 VCYO14598 125 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
CLIC4-202ENST00000488683 ETDBQ3ZM63 59 aa9.33□□□□□ -0.92
CLIC4-202ENST00000488683 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 TMEM89A2RUT3 159 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 G3V4G9 280 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 Q6ZSN1 163 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 FSHBP01225 129 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 Q6YL49 198 aa9.32□□□□□ -0.92
CLIC4-202ENST00000488683 NBEAL2Q6ZNJ1 2754 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 A8MZ25 164 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 J3QLI3 93 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 PMVKQ15126 192 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
CLIC4-202ENST00000488683 MRPL16Q9NX20 251 aaKnown RBP9.31□□□□□ -0.92
CLIC4-202ENST00000488683 A0A0J9YXV3 536 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 TRBV6-5A0A0K0K1A5 114 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 UBE2E2Q96LR5 201 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 LINC01619G3V211 115 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 H7C2G1 150 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 ELANEP08246 267 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 TMEM61Q8N0U2 210 aa9.3□□□□□ -0.92
CLIC4-202ENST00000488683 RRN3P1Q2M238 152 aa9.29□□□□□ -0.92
CLIC4-202ENST00000488683 PTH2Q96A98 100 aa9.29□□□□□ -0.92
CLIC4-202ENST00000488683 TIMM17AQ99595 171 aa9.29□□□□□ -0.92
CLIC4-202ENST00000488683 SPAG8Q99932 426 aaPredicted RBP9.29□□□□□ -0.92
CLIC4-202ENST00000488683 A0A1B0GWB2 263 aa9.29□□□□□ -0.92
CLIC4-202ENST00000488683 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
CLIC4-202ENST00000488683 NPC2P61916 151 aa9.28□□□□□ -0.92
CLIC4-202ENST00000488683 ZNF418Q8TF45 676 aaPredicted RBP9.28□□□□□ -0.92
CLIC4-202ENST00000488683 DLX4Q92988 240 aaPredicted RBP9.28□□□□□ -0.92
CLIC4-202ENST00000488683 Q96MF0 132 aa9.28□□□□□ -0.92
CLIC4-202ENST00000488683 TMEM141Q96I45 108 aa9.28□□□□□ -0.92
CLIC4-202ENST00000488683 TRAV8-3A0A0A6YYJ7 113 aa9.27□□□□□ -0.92
CLIC4-202ENST00000488683 A0A0J9YY99 117 aa9.27□□□□□ -0.92
CLIC4-202ENST00000488683 PSMB2P49721 201 aa9.27□□□□□ -0.92
CLIC4-202ENST00000488683 Q5PR19 223 aa9.27□□□□□ -0.92
CLIC4-202ENST00000488683 SPXQ9BT56 116 aa9.27□□□□□ -0.92
CLIC4-202ENST00000488683 TSPAN13O95857 204 aa9.27□□□□□ -0.93
CLIC4-202ENST00000488683 GTSF1LQ9H1H1 148 aa9.27□□□□□ -0.93
CLIC4-202ENST00000488683 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.26□□□□□ -0.93
CLIC4-202ENST00000488683 IGKV2-29A2NJV5 120 aaPredicted RBP9.26□□□□□ -0.93
CLIC4-202ENST00000488683 TMEM238C9JI98 176 aa9.26□□□□□ -0.93
CLIC4-202ENST00000488683 RNF152Q8N8N0 203 aa9.26□□□□□ -0.93
CLIC4-202ENST00000488683 RAX2Q96IS3 184 aa9.26□□□□□ -0.93
CLIC4-202ENST00000488683 FN1P02751 2386 aaKnown RBP9.26□□□□□ -0.93
CLIC4-202ENST00000488683 CD28P10747 220 aa9.26□□□□□ -0.93
CLIC4-202ENST00000488683 NSUN5P1Q3KNT7 163 aa9.26□□□□□ -0.93
CLIC4-202ENST00000488683 TRPT1Q86TN4 253 aaKnown RBP9.26□□□□□ -0.93
CLIC4-202ENST00000488683 AMELXQ99217 191 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 SPANXB1Q9NS25 103 aaPredicted RBP9.25□□□□□ -0.93
CLIC4-202ENST00000488683 XCL2Q9UBD3 114 aa9.25□□□□□ -0.93
CLIC4-202ENST00000488683 GCN1Q92616 2671 aaKnown RBP9.25□□□□□ -0.93
CLIC4-202ENST00000488683 J3QQQ9 107 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms