RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SEC22C-215ENST00000487701 TEX261Q6UWH6 196 aa4.4□□□□□ -1.71
SEC22C-215ENST00000487701 LYPD5Q6UWN5 251 aa4.4□□□□□ -1.71
SEC22C-215ENST00000487701 FAM210AQ96ND0 272 aa4.4□□□□□ -1.71
SEC22C-215ENST00000487701 Q9UF83 564 aa4.4□□□□□ -1.71
SEC22C-215ENST00000487701 PHLDA3Q9Y5J5 127 aa4.4□□□□□ -1.71
SEC22C-215ENST00000487701 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 TRBV6-4A0A1B0GX49 114 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 C9JQL5 133 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 TMEM250H0YL14 139 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 CIDEAO60543 219 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 CRYGDP07320 174 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 OR5AL1P0C617 328 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 IGLC6P0CF74 106 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 LINC00694P0DN24 101 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 RHOHQ15669 191 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 FAM74A4Q5TZK3 123 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 ZFP2Q6ZN57 461 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 NEGR1Q7Z3B1 354 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 ZFP82Q8N141 532 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 C14orf178Q8N769 122 aaPredicted RBP4.39□□□□□ -1.71
SEC22C-215ENST00000487701 OR2D3Q8NGH3 330 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 OCC1Q8TAD7 63 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 SFRP2Q96HF1 295 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 Q9H8V8 135 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 PKD1P98161 4303 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 PKHD1P08F94 4074 aa4.39□□□□□ -1.71
SEC22C-215ENST00000487701 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
SEC22C-215ENST00000487701 NDUFS6O75380 124 aaKnown RBP4.38□□□□□ -1.71
SEC22C-215ENST00000487701 P01737 135 aa4.38□□□□□ -1.71
SEC22C-215ENST00000487701 SRP19P09132 144 aaKnown RBP4.38□□□□□ -1.71
SEC22C-215ENST00000487701 CEBPGP53567 150 aa4.38□□□□□ -1.71
SEC22C-215ENST00000487701 PRADC1Q9BSG0 188 aa4.38□□□□□ -1.71
SEC22C-215ENST00000487701 EIF5A2Q9GZV4 153 aaKnown RBP4.38□□□□□ -1.71
SEC22C-215ENST00000487701 RNASE7Q9H1E1 156 aaKnown RBP4.38□□□□□ -1.71
SEC22C-215ENST00000487701 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 IFITM10A6NMD0 228 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 SIVA1O15304 175 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 SSTP61278 116 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 RPL36AP83881 106 aaKnown RBP4.37□□□□□ -1.71
SEC22C-215ENST00000487701 GAGE1Q13065 139 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 GAGE4Q13068 117 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 GAGE5Q13069 117 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 SPANXN1Q5VSR9 72 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 LINC01551Q86U37 167 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 WFDC10BQ8IUB3 73 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 FER1L6-AS1Q8NA97 138 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 SMIM7Q9BQ49 75 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 TPPP3Q9BW30 176 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 RPP21Q9H633 154 aaKnown RBP4.37□□□□□ -1.71
SEC22C-215ENST00000487701 BIN3Q9NQY0 253 aa4.37□□□□□ -1.71
SEC22C-215ENST00000487701 A0A1W2PPQ1 181 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 ZNF727A8MUV8 499 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 CTRLP40313 264 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 LINC00315P59091 139 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 RPS20P60866 119 aaKnown RBP4.36□□□□□ -1.71
SEC22C-215ENST00000487701 TTC32Q5I0X7 151 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 LYZL1Q6UWQ5 148 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 LINC00336Q6ZUF6 198 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 SH2D6Q7Z4S9 175 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 C6orf223Q8N319 242 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 ATP6V0E2Q8NHE4 81 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 GTSF1Q8WW33 167 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 LY96Q9Y6Y9 160 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 KIF25-AS1Q9Y6Z4 181 aa4.36□□□□□ -1.71
SEC22C-215ENST00000487701 DNAH10OSP0CZ25 163 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 AMTP48728 403 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 ZNF56Q15929 161 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 Q6ZRN7 208 aaPredicted RBP4.35□□□□□ -1.71
SEC22C-215ENST00000487701 FAM231DQ6ZW35 169 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 TMEM18Q96B42 140 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 AP1S3Q96PC3 154 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 CNFNQ9BYD5 112 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 GTSF1LQ9H1H1 148 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
SEC22C-215ENST00000487701 TRBV10-1A0A0K0K1A3 114 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 XKRY2A2RUG3 117 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 F2Z2F3 143 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 GATCO43716 136 aaKnown RBP4.34□□□□□ -1.71
SEC22C-215ENST00000487701 NTF3P20783 257 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 EVI2AP22794 236 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 ERVFC1-1P60608 527 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 RAB4BP61018 213 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 UBE2D3P61077 147 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 RPL23P62829 140 aaKnown RBP4.34□□□□□ -1.71
SEC22C-215ENST00000487701 UBE2D2P62837 147 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 CACNG7P62955 275 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 IFITM2Q01629 132 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 PEA15Q15121 130 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 SOHLH1Q5JUK2 328 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 LELP1Q5T871 98 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 NEXN-AS1Q8NBZ9 246 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 ISOC2Q96AB3 205 aa4.34□□□□□ -1.71
SEC22C-215ENST00000487701 TRBV7-3A0A075B6L6 115 aa4.33□□□□□ -1.72
SEC22C-215ENST00000487701 IGHV3-38A0A0C4DH36 116 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms