RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 PRR27Q6MZM9 219 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 TMUB2Q71RG4 321 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 PHF5AQ7RTV0 110 aaKnown RBP3.42□□□□□ -1.86
COL4A3-206ENST00000487633 TCTE3Q8IZS6 198 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 CMTM2Q8TAZ6 248 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 RAB24Q969Q5 203 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 HYLS1Q96M11 299 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 CHCHD7Q9BUK0 85 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 PRELID1Q9Y255 219 aa3.42□□□□□ -1.86
COL4A3-206ENST00000487633 TRBV6-8A0A0A6YYG3 113 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 TRBV7-9A0A0J9YWB2 115 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 H0Y9J4 135 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 CXorf1O96002 111 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 ARL14EPLP0DKL9 152 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 TPT1P13693 172 aaKnown RBP3.41□□□□□ -1.86
COL4A3-206ENST00000487633 UBE2D3P61077 147 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 UBE2D2P62837 147 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 RBX1P62877 108 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 GAGE6Q13070 117 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 FAM74A1Q5RGS3 127 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 EIF5AL1Q6IS14 154 aaKnown RBP3.41□□□□□ -1.86
COL4A3-206ENST00000487633 PQLC2Q6ZP29 291 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 C20orf203Q8NBC4 194 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 STOML3Q8TAV4 291 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 FXYD5Q96DB9 178 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 CDIP1Q9H305 208 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 CYTL1Q9NRR1 136 aa3.41□□□□□ -1.86
COL4A3-206ENST00000487633 IGLV4-60A0A075B6I1 120 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.4□□□□□ -1.87
COL4A3-206ENST00000487633 CTXND1A0A1B0GTU2 59 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 UMAD1C9J7I0 102 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 IGLV7-43P04211 117 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 SEC11BP0C7V7 166 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 STAG3L2P0CL84 134 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 STAG3L3P0CL85 134 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 GCHFRP30047 84 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 RPS10P46783 165 aaKnown RBP3.4□□□□□ -1.87
COL4A3-206ENST00000487633 FGF8P55075 233 aaPredicted RBP3.4□□□□□ -1.87
COL4A3-206ENST00000487633 LGALSLQ3ZCW2 172 aaPredicted RBP3.4□□□□□ -1.87
COL4A3-206ENST00000487633 FAM213BQ8TBF2 198 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 SFT2D1Q8WV19 159 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 TMED6Q8WW62 240 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 SSBP4Q9BWG4 385 aaPredicted RBP3.4□□□□□ -1.87
COL4A3-206ENST00000487633 OTORQ9NRC9 128 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 TMEM167BQ9NRX6 74 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 AP5S1Q9NUS5 200 aa3.4□□□□□ -1.87
COL4A3-206ENST00000487633 A0A087X002 238 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 TRAV21A0A0B4J279 112 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 IGKV3D-20A0A0C4DH25 116 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 A0A1B0GV50 99 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 MAP1LC3B2A6NCE7 125 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 K7EQM0 130 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 CIDEAO60543 219 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 IFNA7P01567 189 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 H2AFB1P0C5Y9 115 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 FHITP49789 147 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 UBE2G2P60604 165 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 GNG5P63218 68 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 REG3AQ06141 175 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 FAM74A4Q5TZK3 123 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 GOLT1AQ6ZVE7 132 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 SLC51BQ86UW2 128 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 C9orf62Q8N4C0 152 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 CHCHD5Q9BSY4 110 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 MAP1LC3BQ9GZQ8 125 aa3.39□□□□□ -1.87
COL4A3-206ENST00000487633 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
COL4A3-206ENST00000487633 RBAKDNA6NC62 111 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 TEX46H3BTG2 121 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 MT-ND6P03923 174 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 CRYGAP11844 174 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 SUMO1P63165 101 aaKnown RBP3.38□□□□□ -1.87
COL4A3-206ENST00000487633 ZNF726P1Q15940 193 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 TPRXLQ17RH7 258 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 CST9LP1Q5W188 147 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 KCNIP4Q6PIL6 250 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 SLC7A5P1Q8MH63 180 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 FER1L6-AS1Q8NA97 138 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 C5orf17Q8NAS9 161 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 NEXN-AS1Q8NBZ9 246 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 PTH2Q96A98 100 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 KCNS1Q96KK3 526 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 NDFIP1Q9BT67 221 aa3.38□□□□□ -1.87
COL4A3-206ENST00000487633 NKX6-2Q9C056 277 aaPredicted RBP3.38□□□□□ -1.87
COL4A3-206ENST00000487633 RPP21Q9H633 154 aaKnown RBP3.38□□□□□ -1.87
COL4A3-206ENST00000487633 SERTM2A0A1B0GWG4 89 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 A0A1W2PRE2 83 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 GAGE12HA6NDE8 117 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 KRTAP4-16G5E9R7 235 aaPredicted RBP3.37□□□□□ -1.87
COL4A3-206ENST00000487633 ATP6V1G1O75348 118 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 TCRAP04437 139 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 AMTP48728 403 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 ARL6IP6Q8N6S5 226 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 MBD3L1Q8WWY6 194 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 DIRC1Q969H9 104 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 TREM1Q9NP99 234 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 EPDR1Q9UM22 224 aa3.37□□□□□ -1.87
COL4A3-206ENST00000487633 IGLV7-46A0A075B6I9 117 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms