RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 SRSF9Q13242 221 aaKnown RBP eCLIP9.45□□□□□ -0.9
NME1-208ENST00000487481 PRR27Q6MZM9 219 aa9.45□□□□□ -0.9
NME1-208ENST00000487481 TRBV25-1A0A075B6N4 114 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 GCHFRP30047 84 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 ZNF56Q15929 161 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 LYPD6BQ8NI32 183 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 SMIM3Q9BZL3 60 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 VAX2Q9UIW0 290 aa9.44□□□□□ -0.9
NME1-208ENST00000487481 TRAV34A0A0B4J273 112 aa9.43□□□□□ -0.9
NME1-208ENST00000487481 SIX6O95475 246 aa9.43□□□□□ -0.9
NME1-208ENST00000487481 PRSS3P2Q8NHM4 247 aa9.43□□□□□ -0.9
NME1-208ENST00000487481 DERL1Q9BUN8 251 aa9.43□□□□□ -0.9
NME1-208ENST00000487481 TRBV6-1A0A0K0K1D8 114 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 SH2D1AO60880 128 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 RPS10P46783 165 aaKnown RBP9.42□□□□□ -0.9
NME1-208ENST00000487481 CRIP1P50238 77 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 CYCSP99999 105 aaKnown RBP9.42□□□□□ -0.9
NME1-208ENST00000487481 IQCJQ1A5X6 159 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 Q6ZRP5 223 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 Q86TA4 180 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
NME1-208ENST00000487481 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
NME1-208ENST00000487481 H7C1H1 209 aa9.41□□□□□ -0.9
NME1-208ENST00000487481 FAM162BQ5T6X4 162 aa9.41□□□□□ -0.9
NME1-208ENST00000487481 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
NME1-208ENST00000487481 C20orf203Q8NBC4 194 aa9.41□□□□□ -0.9
NME1-208ENST00000487481 IGHV1-24A0A0C4DH33 117 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 A0A1B0GVG6 124 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 IFNA7P01567 189 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 LINC01559Q495D7 138 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 COX8CQ7Z4L0 72 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 PPP1R1CQ8WVI7 109 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 RAB24Q969Q5 203 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 LINC00474Q9P2X8 69 aa9.4□□□□□ -0.9
NME1-208ENST00000487481 TMSB15BA0A087X1C1 80 aa9.39□□□□□ -0.91
NME1-208ENST00000487481 PET100P0DJ07 73 aa9.39□□□□□ -0.91
NME1-208ENST00000487481 RPL12P30050 165 aaKnown RBP9.39□□□□□ -0.91
NME1-208ENST00000487481 RAB5CP51148 216 aa9.39□□□□□ -0.91
NME1-208ENST00000487481 WFDC1Q9HC57 220 aa9.39□□□□□ -0.91
NME1-208ENST00000487481 A0A096LNI7 61 aa9.38□□□□□ -0.91
NME1-208ENST00000487481 A0A1B0GUV1 79 aa9.38□□□□□ -0.91
NME1-208ENST00000487481 A0A1W2PRE2 83 aa9.38□□□□□ -0.91
NME1-208ENST00000487481 PEX7O00628 323 aa9.38□□□□□ -0.91
NME1-208ENST00000487481 CXorf1O96002 111 aa9.38□□□□□ -0.91
NME1-208ENST00000487481 IGLV4-60A0A075B6I1 120 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 FAM240BA0A1B0GVZ2 78 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 IFITM3Q01628 133 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 ZNF664Q8N3J9 261 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 GFRA4Q9GZZ7 299 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
NME1-208ENST00000487481 F5H697 171 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 MPC2O95563 127 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 ZNF674Q2M3X9 581 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 HIGD2BQ4VC39 106 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 AQP10Q96PS8 301 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 PSORS1C2Q9UIG4 136 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 PKIGQ9Y2B9 76 aa9.36□□□□□ -0.91
NME1-208ENST00000487481 H2BFSP57053 126 aa9.35□□□□□ -0.91
NME1-208ENST00000487481 OR10AG1Q8NH19 301 aa9.35□□□□□ -0.91
NME1-208ENST00000487481 HIST1H2BAQ96A08 127 aa9.35□□□□□ -0.91
NME1-208ENST00000487481 ZNF471Q9BX82 626 aaPredicted RBP9.35□□□□□ -0.91
NME1-208ENST00000487481 hCG_2014768A0A024R1R8 64 aa9.34□□□□□ -0.91
NME1-208ENST00000487481 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
NME1-208ENST00000487481 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
NME1-208ENST00000487481 MBP02144 154 aa9.34□□□□□ -0.91
NME1-208ENST00000487481 SULT1A2P50226 295 aa9.34□□□□□ -0.91
NME1-208ENST00000487481 TMEM243Q9BU79 118 aa9.34□□□□□ -0.91
NME1-208ENST00000487481 GVQW2A0A096LPI5 108 aaPredicted RBP9.33□□□□□ -0.92
NME1-208ENST00000487481 PSMG3Q9BT73 122 aaPredicted RBP9.33□□□□□ -0.92
NME1-208ENST00000487481 CXCL1P09341 107 aa9.32□□□□□ -0.92
NME1-208ENST00000487481 CACNG7P62955 275 aa9.32□□□□□ -0.92
NME1-208ENST00000487481 FMC1Q96HJ9 113 aa9.32□□□□□ -0.92
NME1-208ENST00000487481 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
NME1-208ENST00000487481 ACTR3CQ9C0K3 210 aaPredicted RBP9.32□□□□□ -0.92
NME1-208ENST00000487481 SNAI2O43623 268 aa9.31□□□□□ -0.92
NME1-208ENST00000487481 SMIM17P0DL12 118 aa9.31□□□□□ -0.92
NME1-208ENST00000487481 UBE2G1P62253 170 aa9.31□□□□□ -0.92
NME1-208ENST00000487481 SERF2P84101 59 aa9.31□□□□□ -0.92
NME1-208ENST00000487481 SPANXN1Q5VSR9 72 aa9.31□□□□□ -0.92
NME1-208ENST00000487481 INO80EQ8NBZ0 244 aaPredicted RBP9.31□□□□□ -0.92
NME1-208ENST00000487481 ENKURQ8TC29 256 aa9.31□□□□□ -0.92
NME1-208ENST00000487481 ATP6V0CP27449 155 aa9.3□□□□□ -0.92
NME1-208ENST00000487481 UBE2G2P60604 165 aa9.3□□□□□ -0.92
NME1-208ENST00000487481 AP1S3Q96PC3 154 aa9.3□□□□□ -0.92
NME1-208ENST00000487481 FAM74A7A6NL05 159 aa9.29□□□□□ -0.92
NME1-208ENST00000487481 UBE2L6O14933 153 aa9.29□□□□□ -0.92
NME1-208ENST00000487481 LTAP01374 205 aa9.29□□□□□ -0.92
NME1-208ENST00000487481 OR5AL1P0C617 328 aa9.29□□□□□ -0.92
NME1-208ENST00000487481 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
NME1-208ENST00000487481 M0QY20 66 aa9.28□□□□□ -0.92
NME1-208ENST00000487481 PRR4Q16378 134 aa9.28□□□□□ -0.92
NME1-208ENST00000487481 AKAP14Q86UN6 197 aa9.28□□□□□ -0.92
NME1-208ENST00000487481 PRR26Q8N8Z3 221 aa9.28□□□□□ -0.92
NME1-208ENST00000487481 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
NME1-208ENST00000487481 TNFSF18Q9UNG2 199 aa9.28□□□□□ -0.92
NME1-208ENST00000487481 MUC21A0A140T8X8 626 aa9.27□□□□□ -0.93
NME1-208ENST00000487481 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms