RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 G0S2P27469 103 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 RPL32P62910 135 aaKnown RBP5.1□□□□□ -1.59
SF3A3-206ENST00000487062 LAGE3Q14657 143 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 PMCHL1Q16048 86 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 LGALS9BQ3B8N2 356 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 ORMDL2Q53FV1 153 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 SUMO4Q6EEV6 95 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 ZNF705AQ6ZN79 300 aaPredicted RBP5.1□□□□□ -1.59
SF3A3-206ENST00000487062 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 RNASE8Q8TDE3 154 aaKnown RBP5.1□□□□□ -1.59
SF3A3-206ENST00000487062 C14orf144Q96I85 54 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 MAP1LC3CQ9BXW4 147 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 EDA2RQ9HAV5 297 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 ATRQ13535 2644 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 IGLV2-18A0A075B6J9 118 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 TRGV1A0A0A0MS02 117 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 TRBV6-5A0A0K0K1A5 114 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 C20orf202A1L168 122 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 TCAPO15273 167 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 RS1O15537 224 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 CIDEAO60543 219 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 C3orf79P0CE67 100 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 FCER1GP30273 86 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 DAZ2Q13117 558 aaKnown RBP5.09□□□□□ -1.59
SF3A3-206ENST00000487062 CFAP126Q5VTH2 177 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 ZFP2Q6ZN57 461 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 RPL39LQ96EH5 51 aaKnown RBP5.09□□□□□ -1.59
SF3A3-206ENST00000487062 TMEM70Q9BUB7 260 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 KRTAP4-8Q9BYQ9 185 aa5.09□□□□□ -1.59
SF3A3-206ENST00000487062 MRPL16Q9NX20 251 aaKnown RBP5.09□□□□□ -1.59
SF3A3-206ENST00000487062 TENM1Q9UKZ4 2725 aa5.09□□□□□ -1.6
SF3A3-206ENST00000487062 JMJD1CQ15652 2540 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 TRAV4A0A0B4J268 109 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 LINC01549A6NIU2 74 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 M0QY20 66 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 VCYO14598 125 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 EGFEM1PQ0D2K5 195 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 PET117Q6UWS5 81 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 OR4C5Q8NGB2 326 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 KIR2DL4Q99706 377 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 OVOL2Q9BRP0 275 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 NACAE9PAV3 2078 aa5.08□□□□□ -1.6
SF3A3-206ENST00000487062 SDHAF1A6NFY7 115 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 SYS1-DBNDD2H3BUS1 97 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 ATP5LO75964 103 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 NUDT3O95989 172 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 IGHV3-53P01767 116 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 POLR2KP53803 58 aaKnown RBP5.07□□□□□ -1.6
SF3A3-206ENST00000487062 UFSP1Q6NVU6 142 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 DNAJC30Q96LL9 226 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 NOP10Q9NPE3 64 aaKnown RBP5.07□□□□□ -1.6
SF3A3-206ENST00000487062 TNFRSF18Q9Y5U5 241 aa5.07□□□□□ -1.6
SF3A3-206ENST00000487062 TRGV2A0A075B6R0 118 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 A0A096LNJ9 63 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 TRBV27A0A0K0K1C4 114 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 IGHV4-30-4P0DP06 118 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 Q6ZTI0 123 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 LINC00173Q6ZV60 143 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 SPATA12Q7Z6I5 190 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 VAMP8Q9BV40 100 aa5.06□□□□□ -1.6
SF3A3-206ENST00000487062 GAGE12BA1L429 117 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 PLAC8L1A1L4L8 177 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 LYRM9A8MSI8 78 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 A8MZ25 164 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 I3L3M4 83 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 GAGE7O76087 117 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 GAGE12FP0CL80 117 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 GAGE12GP0CL81 117 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 GAGE12IP0CL82 117 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 MIFP14174 115 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 PTTG1IPP53801 180 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 RHOHQ15669 191 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 DEFB135Q30KP9 77 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 TEX43Q6ZNM6 134 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 OR11H2Q8NH07 326 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 CYSLTR1Q9Y271 337 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 VWFP04275 2813 aa5.05□□□□□ -1.6
SF3A3-206ENST00000487062 TRGV4A0A0C4DH28 118 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 TRBV10-1A0A0K0K1A3 114 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 A0A1B0GV90 55 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 H0Y8G0 127 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.04□□□□□ -1.6
SF3A3-206ENST00000487062 K7EQD1 137 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 M0R143 59 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 PRSS1P07477 247 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 EMP1P54849 157 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
SF3A3-206ENST00000487062 LINC01545Q5VT33 79 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 LGALS9CQ6DKI2 356 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 C2orf66Q6UXQ4 117 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 Q6ZN92 141 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 ZNF664Q8N3J9 261 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 Q8N976 141 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 NEXN-AS1Q8NBZ9 246 aa5.04□□□□□ -1.6
SF3A3-206ENST00000487062 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms