RNA–Protein interactions for RNA: ENST00000486935.2

SEMA4D-219, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-219ENST00000486935 ZFP2Q6ZN57 461 aa10.76□□□□□ -0.69
SEMA4D-219ENST00000486935 HLA-DQA1P01909 254 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 RAB4AP20338 218 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 HOXA5P20719 270 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 LINC00315P59091 139 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 FAM104BQ5XKR9 115 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 SUMO4Q6EEV6 95 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 FRZBQ92765 325 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 RNF185Q96GF1 192 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 GNB1LQ9BYB4 327 aa10.75□□□□□ -0.69
SEMA4D-219ENST00000486935 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 APCSP02743 223 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 RAB5AP20339 215 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 RPS10P46783 165 aaKnown RBP10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 SLAQ13239 276 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 FHL2Q14192 279 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 MRPL51Q4U2R6 128 aaKnown RBP10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 Q6ZSN1 163 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 MRPL18Q9H0U6 180 aaKnown RBP10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 TRAPPC1Q9Y5R8 145 aa10.74□□□□□ -0.69
SEMA4D-219ENST00000486935 SMKR1H3BMG3 65 aa10.73□□□□□ -0.69
SEMA4D-219ENST00000486935 CIDEAO60543 219 aa10.73□□□□□ -0.69
SEMA4D-219ENST00000486935 NCR2O95944 276 aa10.73□□□□□ -0.69
SEMA4D-219ENST00000486935 MT-ND6P03923 174 aa10.73□□□□□ -0.69
SEMA4D-219ENST00000486935 C1orf134Q5TEV5 83 aa10.73□□□□□ -0.69
SEMA4D-219ENST00000486935 GATA1P15976 413 aaPredicted RBP10.72□□□□□ -0.69
SEMA4D-219ENST00000486935 CCL18P55774 89 aa10.72□□□□□ -0.69
SEMA4D-219ENST00000486935 FABP9Q0Z7S8 132 aa10.72□□□□□ -0.69
SEMA4D-219ENST00000486935 KIAA1644Q3SXP7 199 aa10.72□□□□□ -0.69
SEMA4D-219ENST00000486935 D6R8Y8 96 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 K7EQD1 137 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 CKS2P33552 79 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 KIAA1109Q2LD37 5005 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 SLC25A29Q8N8R3 303 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 MRAP2Q96G30 205 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 HHLA3Q9XRX5 114 aa10.71□□□□□ -0.69
SEMA4D-219ENST00000486935 PKD1P98161 4303 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 TRAV26-1A0A087WT03 109 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 A0A0J9YY99 117 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 GAS8-AS1O95177 125 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 PRO0255Q9UI72 69 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 LINC00588Q9Y4M8 146 aa10.7□□□□□ -0.7
SEMA4D-219ENST00000486935 H7C1H1 209 aa10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 M0QY20 66 aa10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 PAX4O43316 350 aa10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 CRYBA4P53673 196 aa10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 RHOHQ15669 191 aa10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 PRADC1Q9BSG0 188 aa10.69□□□□□ -0.7
SEMA4D-219ENST00000486935 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
SEMA4D-219ENST00000486935 NBDYA0A0U1RRE5 68 aa10.68□□□□□ -0.7
SEMA4D-219ENST00000486935 TRBV6-4A0A1B0GX49 114 aa10.68□□□□□ -0.7
SEMA4D-219ENST00000486935 TRGC2P03986 189 aa10.68□□□□□ -0.7
SEMA4D-219ENST00000486935 OR10J3Q5JRS4 329 aa10.68□□□□□ -0.7
SEMA4D-219ENST00000486935 ORMDL3Q8N138 153 aa10.68□□□□□ -0.7
SEMA4D-219ENST00000486935 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
SEMA4D-219ENST00000486935 VSIG2Q96IQ7 327 aa10.67□□□□□ -0.7
SEMA4D-219ENST00000486935 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
SEMA4D-219ENST00000486935 Q9UF83 564 aa10.67□□□□□ -0.7
SEMA4D-219ENST00000486935 GAGE12JA6NER3 117 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 NPYP01303 97 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 PPBPP02775 128 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 GYPEP15421 78 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 SRIP30626 198 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 GAGE1Q13065 139 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 GAGE4Q13068 117 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 GAGE5Q13069 117 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 NRACQ8N912 160 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 NEXN-AS1Q8NBZ9 246 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 PKHD1P08F94 4074 aa10.66□□□□□ -0.7
SEMA4D-219ENST00000486935 TRBV10-1A0A0K0K1A3 114 aa10.65□□□□□ -0.7
SEMA4D-219ENST00000486935 TNFRSF6BO95407 300 aa10.65□□□□□ -0.7
SEMA4D-219ENST00000486935 C6orf223Q8N319 242 aa10.65□□□□□ -0.7
SEMA4D-219ENST00000486935 Q9H8V8 135 aa10.65□□□□□ -0.7
SEMA4D-219ENST00000486935 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
SEMA4D-219ENST00000486935 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
SEMA4D-219ENST00000486935 PPP1R17O96001 155 aa10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 RPL36AP83881 106 aaKnown RBP10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 TNP2Q05952 138 aa10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 ESRGQ1W209 222 aa10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 RPL36ALQ969Q0 106 aaKnown RBP10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 DNAJC30Q96LL9 226 aa10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 ALKBH7Q9BT30 221 aaPredicted RBP10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 ST20Q9HBF5 79 aa10.64□□□□□ -0.71
SEMA4D-219ENST00000486935 DNAH11Q96DT5 4516 aa10.63□□□□□ -0.71
SEMA4D-219ENST00000486935 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 A0A096LPF7 62 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 H3BNG1 76 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 PHOX2AO14813 284 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 LAMTOR2Q9Y2Q5 125 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 ICOSQ9Y6W8 199 aa10.62□□□□□ -0.71
SEMA4D-219ENST00000486935 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
SEMA4D-219ENST00000486935 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
SEMA4D-219ENST00000486935 IQCJQ1A5X6 159 aa10.61□□□□□ -0.71
SEMA4D-219ENST00000486935 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms