RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 I3L3M4 83 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 FAM74A4Q5TZK3 123 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 PIEZO2Q9H5I5 2752 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 ATMQ13315 3056 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 OOSP1A8MZH6 123 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 NSUN5P1Q3KNT7 163 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 LINC00527Q9UJ94 153 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 ZFHX3Q15911 3703 aa7.91□□□□□ -1.14
CCDC171-208ENST00000486641 TRAV8-3A0A0A6YYJ7 113 aa7.9□□□□□ -1.14
CCDC171-208ENST00000486641 UNQ9165/PRO28630Q6UXU0 137 aa7.9□□□□□ -1.14
CCDC171-208ENST00000486641 NRGNQ92686 78 aa7.9□□□□□ -1.14
CCDC171-208ENST00000486641 PRRC2AP48634 2157 aaKnown RBP7.9□□□□□ -1.15
CCDC171-208ENST00000486641 IGKV3-7A0A075B6H7 116 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 IGLV4-3A0A075B6K6 122 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 LOC107984640A0A0U1RRK4 108 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.15
CCDC171-208ENST00000486641 LY6DQ14210 128 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 MINOS1Q5TGZ0 78 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 C20orf203Q8NBC4 194 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 TIMM21Q9BVV7 248 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 MINOS1-NBL1R4GNA1 71 aa7.9□□□□□ -1.15
CCDC171-208ENST00000486641 CACNA1BQ00975 2339 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 M0QY20 66 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 RHOHQ15669 191 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 C9orf153Q5TBE3 101 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 C3orf22Q8N5N4 141 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 DNAJC30Q96LL9 226 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 SPANXDQ9BXN6 97 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 IMUPQ9GZP8 106 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 SPANXCQ9NY87 97 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 LINC01560Q8TB33 94 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 SMCR5Q8TEV8 140 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 CSDC2Q9Y534 153 aaKnown RBP7.89□□□□□ -1.15
CCDC171-208ENST00000486641 APC2O95996 2303 aa7.89□□□□□ -1.15
CCDC171-208ENST00000486641 MAP1BP46821 2468 aaKnown RBP7.88□□□□□ -1.15
CCDC171-208ENST00000486641 A8MZ25 164 aa7.88□□□□□ -1.15
CCDC171-208ENST00000486641 NDUFA7O95182 113 aa7.88□□□□□ -1.15
CCDC171-208ENST00000486641 TRBV12-3P01733 135 aa7.88□□□□□ -1.15
CCDC171-208ENST00000486641 MIAQ16674 131 aa7.88□□□□□ -1.15
CCDC171-208ENST00000486641 DEFB124Q8NES8 71 aa7.88□□□□□ -1.15
CCDC171-208ENST00000486641 DUX5Q96PT3 197 aa7.87□□□□□ -1.15
CCDC171-208ENST00000486641 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
CCDC171-208ENST00000486641 KLLNB2CW77 178 aa7.87□□□□□ -1.15
CCDC171-208ENST00000486641 TMEM61Q8N0U2 210 aa7.87□□□□□ -1.15
CCDC171-208ENST00000486641 FAM104AQ969W3 186 aa7.87□□□□□ -1.15
CCDC171-208ENST00000486641 TRAV12-3A0A0B4J271 114 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 IGHV1-58A0A0C4DH39 117 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 ACYP1P07311 99 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 ZFP36P26651 326 aaKnown RBP7.86□□□□□ -1.15
CCDC171-208ENST00000486641 HERVK_113P63121 156 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 DCANP1Q8TF63 244 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 KLK5Q9Y337 293 aaPredicted RBP7.86□□□□□ -1.15
CCDC171-208ENST00000486641 UQCRQO14949 82 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 NPFFO15130 113 aa7.86□□□□□ -1.15
CCDC171-208ENST00000486641 ATP5J2P56134 94 aa7.85□□□□□ -1.15
CCDC171-208ENST00000486641 MRPS36P82909 103 aaKnown RBP7.85□□□□□ -1.15
CCDC171-208ENST00000486641 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
CCDC171-208ENST00000486641 RNASE13Q5GAN3 156 aaKnown RBP7.85□□□□□ -1.15
CCDC171-208ENST00000486641 DAND5Q8N907 189 aa7.85□□□□□ -1.15
CCDC171-208ENST00000486641 CITED2Q99967 270 aaPredicted RBP7.85□□□□□ -1.15
CCDC171-208ENST00000486641 ASH1LQ9NR48 2969 aaKnown RBP7.85□□□□□ -1.15
CCDC171-208ENST00000486641 MED13LQ71F56 2210 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 CD28P10747 220 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 LINC00643Q86TS7 51 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 VSIG2Q96IQ7 327 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 C9orf85Q96MD7 179 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 SIRPDQ9H106 197 aa7.84□□□□□ -1.15
CCDC171-208ENST00000486641 NDUFA4O00483 81 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 CACNA1HO95180 2353 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 TRAV41A0A0B4J266 112 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 FAM223BA6NKX1 122 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 C5orf47Q569G3 176 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 FAM223AQ8IWN6 122 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 C5orf56Q8N8D9 126 aa7.83□□□□□ -1.16
CCDC171-208ENST00000486641 GRNP28799 593 aaKnown RBP7.82□□□□□ -1.16
CCDC171-208ENST00000486641 SAA4P35542 130 aa7.82□□□□□ -1.16
CCDC171-208ENST00000486641 SDIM1Q6ZPB5 146 aa7.82□□□□□ -1.16
CCDC171-208ENST00000486641 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
CCDC171-208ENST00000486641 TMEM219Q86XT9 240 aa7.82□□□□□ -1.16
CCDC171-208ENST00000486641 RHPN1-AS1Q9BWJ2 59 aa7.82□□□□□ -1.16
CCDC171-208ENST00000486641 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
CCDC171-208ENST00000486641 SPTBN2O15020 2390 aa7.82□□□□□ -1.16
CCDC171-208ENST00000486641 C5orf38Q86SI9 138 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 LRRC75A-AS1Q8N1F1 130 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 TRAV12-2A0A075B6T6 113 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 SMIM9A6NGZ8 99 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 IGHV3-11P01762 117 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 COX7CP15954 63 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 DAZ2Q13117 558 aaKnown RBP7.81□□□□□ -1.16
CCDC171-208ENST00000486641 C19orf54Q5BKX5 351 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 DAZ4Q86SG3 579 aaKnown RBP7.81□□□□□ -1.16
CCDC171-208ENST00000486641 C2orf48Q96LS8 159 aa7.81□□□□□ -1.16
CCDC171-208ENST00000486641 DAZ1Q9NQZ3 744 aaKnown RBP7.81□□□□□ -1.16
CCDC171-208ENST00000486641 DAZ3Q9NR90 486 aaKnown RBP7.81□□□□□ -1.16
CCDC171-208ENST00000486641 J3KT08 172 aa7.8□□□□□ -1.16
CCDC171-208ENST00000486641 EDN2P20800 178 aa7.8□□□□□ -1.16
CCDC171-208ENST00000486641 Q8NA96 180 aa7.8□□□□□ -1.16
CCDC171-208ENST00000486641 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
CCDC171-208ENST00000486641 COX7A2LO14548 114 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms