RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 SLC25A29Q8N8R3 303 aa11.38□□□□□ -0.59
ZNF248-206ENST00000485560 NIT2Q9NQR4 276 aa11.38□□□□□ -0.59
ZNF248-206ENST00000485560 ATP5G1P05496 136 aa11.37□□□□□ -0.59
ZNF248-206ENST00000485560 BAGE3Q86Y29 109 aa11.37□□□□□ -0.59
ZNF248-206ENST00000485560 MAP1LC3AQ9H492 121 aa11.37□□□□□ -0.59
ZNF248-206ENST00000485560 HUWE1Q7Z6Z7 4374 aaKnown RBP11.36□□□□□ -0.59
ZNF248-206ENST00000485560 K7EQD1 137 aa11.36□□□□□ -0.59
ZNF248-206ENST00000485560 PPP1R17O96001 155 aa11.36□□□□□ -0.59
ZNF248-206ENST00000485560 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
ZNF248-206ENST00000485560 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
ZNF248-206ENST00000485560 TRBV6-5A0A0K0K1A5 114 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 S100A6P06703 90 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 IFI27P40305 119 aaPredicted RBP11.35□□□□□ -0.59
ZNF248-206ENST00000485560 LINC00310P59036 64 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 NEXN-AS1Q8NBZ9 246 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 C11orf45Q8TAV5 145 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 C20orf78Q9BR46 151 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 ST20Q9HBF5 79 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 HHLA3Q9XRX5 114 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 PRSS47A8MTI9 375 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 NHLRC4P0CG21 123 aaPredicted RBP11.35□□□□□ -0.59
ZNF248-206ENST00000485560 HTN3P15516 51 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
ZNF248-206ENST00000485560 COA6Q5JTJ3 125 aaKnown RBP11.35□□□□□ -0.59
ZNF248-206ENST00000485560 NIT1Q86X76 327 aa11.35□□□□□ -0.59
ZNF248-206ENST00000485560 NUPR1O60356 82 aa11.34□□□□□ -0.59
ZNF248-206ENST00000485560 SERF1AO75920 110 aa11.34□□□□□ -0.59
ZNF248-206ENST00000485560 Q6ZTC4 211 aa11.34□□□□□ -0.59
ZNF248-206ENST00000485560 PRSS3P2Q8NHM4 247 aa11.34□□□□□ -0.59
ZNF248-206ENST00000485560 DNAH9Q9NYC9 4486 aa11.34□□□□□ -0.59
ZNF248-206ENST00000485560 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 LOC100131303A0A0U1RQF7 123 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 SDHAF1A6NFY7 115 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 F5H768 121 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 CRYBA4P53673 196 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 POLR2KP53803 58 aaKnown RBP11.33□□□□□ -0.6
ZNF248-206ENST00000485560 SNRPEP62304 92 aaKnown RBP11.33□□□□□ -0.6
ZNF248-206ENST00000485560 TMEM70Q9BUB7 260 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 SMIM2Q9BVW6 85 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
ZNF248-206ENST00000485560 TRBV10-1A0A0K0K1A3 114 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 LINC00614P0C842 121 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 RHOHQ15669 191 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 RNASEKQ6P5S7 137 aaKnown RBP11.32□□□□□ -0.6
ZNF248-206ENST00000485560 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 DNAJC30Q96LL9 226 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 PRO0255Q9UI72 69 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 Q8N8P6 123 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 PRADC1Q9BSG0 188 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
ZNF248-206ENST00000485560 TGP01266 2768 aa11.32□□□□□ -0.6
ZNF248-206ENST00000485560 TRBV7-3A0A075B6L6 115 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 GAGE12JA6NER3 117 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 C5orf52A6NGY3 159 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 PMCHP20382 165 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 GAGE1Q13065 139 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 GAGE4Q13068 117 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 GAGE5Q13069 117 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 GAGE13Q4V321 117 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 FA2HQ7L5A8 372 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
ZNF248-206ENST00000485560 RPL32P62910 135 aaKnown RBP11.3□□□□□ -0.6
ZNF248-206ENST00000485560 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
ZNF248-206ENST00000485560 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
ZNF248-206ENST00000485560 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
ZNF248-206ENST00000485560 A0A0J9YY99 117 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 TRBV27A0A0K0K1C4 114 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 VCYO14598 125 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 TCAPO15273 167 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 PAX4O43316 350 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 PDZD11Q5EBL8 140 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
ZNF248-206ENST00000485560 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 GYPEP15421 78 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 PHLDA1Q8WV24 401 aaPredicted RBP11.29□□□□□ -0.6
ZNF248-206ENST00000485560 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
ZNF248-206ENST00000485560 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
ZNF248-206ENST00000485560 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
ZNF248-206ENST00000485560 ESDP10768 282 aa11.28□□□□□ -0.6
ZNF248-206ENST00000485560 UBE2D3P61077 147 aa11.28□□□□□ -0.6
ZNF248-206ENST00000485560 UBE2D2P62837 147 aa11.28□□□□□ -0.6
ZNF248-206ENST00000485560 I3L3M4 83 aa11.27□□□□□ -0.61
ZNF248-206ENST00000485560 HSBP1O75506 76 aa11.27□□□□□ -0.61
ZNF248-206ENST00000485560 PMCHL1Q16048 86 aa11.27□□□□□ -0.61
ZNF248-206ENST00000485560 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.61
ZNF248-206ENST00000485560 FAM19A2Q8N3H0 131 aa11.27□□□□□ -0.61
ZNF248-206ENST00000485560 DEFB131BA0A096LNP1 70 aa11.26□□□□□ -0.61
ZNF248-206ENST00000485560 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
ZNF248-206ENST00000485560 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
ZNF248-206ENST00000485560 TSHBP01222 138 aa11.25□□□□□ -0.61
ZNF248-206ENST00000485560 LAGE3Q14657 143 aa11.25□□□□□ -0.61
ZNF248-206ENST00000485560 STAB2Q8WWQ8 2551 aa11.25□□□□□ -0.61
ZNF248-206ENST00000485560 IGHV1-24A0A0C4DH33 117 aa11.24□□□□□ -0.61
ZNF248-206ENST00000485560 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
ZNF248-206ENST00000485560 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
ZNF248-206ENST00000485560 A0A096LNJ9 63 aa11.23□□□□□ -0.61
ZNF248-206ENST00000485560 TRAV10A0A0B4J240 114 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms