RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 C20orf78Q9BR46 151 aa14.46□□□□□ -0.09
VCPKMT-203ENST00000484763 SUMO2P61956 95 aaKnown RBP14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 COA6Q5JTJ3 125 aaKnown RBP14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 SLC25A29Q8N8R3 303 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 TRBV6-5A0A0K0K1A5 114 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 LOC389332A0A1B0GUA5 103 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 TRBV6-4A0A1B0GX49 114 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 P0DMU3 169 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 FAM231AP0DMU4 169 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 FAM231CP0DMU5 169 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 C12orf74Q32Q52 190 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 ST20Q9HBF5 79 aa14.45□□□□□ -0.1
VCPKMT-203ENST00000484763 PRSS47A8MTI9 375 aa14.44□□□□□ -0.1
VCPKMT-203ENST00000484763 NHLRC4P0CG21 123 aaPredicted RBP14.44□□□□□ -0.1
VCPKMT-203ENST00000484763 TRBV10-1A0A0K0K1A3 114 aa14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 PRSS3P2Q8NHM4 247 aa14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 HOXA5P20719 270 aa14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 IFI27P40305 119 aaPredicted RBP14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 RHOHQ15669 191 aa14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 NEXN-AS1Q8NBZ9 246 aa14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 C11orf45Q8TAV5 145 aa14.43□□□□□ -0.1
VCPKMT-203ENST00000484763 PRKDCP78527 4128 aaKnown RBP14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 SERF1AO75920 110 aa14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 PMCHP20382 165 aa14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 DNAJC30Q96LL9 226 aa14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 SMIM2Q9BVW6 85 aa14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 NXT2Q9NPJ8 142 aaKnown RBP14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 HHLA3Q9XRX5 114 aa14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 TNFRSF18Q9Y5U5 241 aa14.42□□□□□ -0.1
VCPKMT-203ENST00000484763 SDHAF1A6NFY7 115 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 LINC00310P59036 64 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 RPL32P62910 135 aaKnown RBP14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 RNASEKQ6P5S7 137 aaKnown RBP14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 NIT1Q86X76 327 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 TMEM70Q9BUB7 260 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 SNRPEP62304 92 aaKnown RBP14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 FA2HQ7L5A8 372 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 Q8N8P6 123 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 URB1-AS1Q96HZ7 61 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 PRADC1Q9BSG0 188 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 Q9UF83 564 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 PRO0255Q9UI72 69 aa14.41□□□□□ -0.1
VCPKMT-203ENST00000484763 LINC00614P0C842 121 aa14.4□□□□□ -0.1
VCPKMT-203ENST00000484763 POLR2KP53803 58 aaKnown RBP14.4□□□□□ -0.1
VCPKMT-203ENST00000484763 CHCHD1Q96BP2 118 aaKnown RBP14.4□□□□□ -0.1
VCPKMT-203ENST00000484763 IGLV2-18A0A075B6J9 118 aa14.39□□□□□ -0.11
VCPKMT-203ENST00000484763 C5orf52A6NGY3 159 aa14.39□□□□□ -0.11
VCPKMT-203ENST00000484763 HTN3P15516 51 aa14.39□□□□□ -0.11
VCPKMT-203ENST00000484763 CRYBA4P53673 196 aa14.39□□□□□ -0.11
VCPKMT-203ENST00000484763 Q6ZTC4 211 aa14.39□□□□□ -0.11
VCPKMT-203ENST00000484763 COL7A1Q02388 2944 aa14.39□□□□□ -0.11
VCPKMT-203ENST00000484763 F5H768 121 aa14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 NANOS2P60321 138 aaKnown RBP14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 RPL36AP83881 106 aaKnown RBP14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 RPL36ALQ969Q0 106 aaKnown RBP14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 AP5S1Q9NUS5 200 aa14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 TRBV7-3A0A075B6L6 115 aa14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 TRBV27A0A0K0K1C4 114 aa14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 ESDP10768 282 aa14.38□□□□□ -0.11
VCPKMT-203ENST00000484763 VCYO14598 125 aa14.37□□□□□ -0.11
VCPKMT-203ENST00000484763 NUPR1O60356 82 aa14.37□□□□□ -0.11
VCPKMT-203ENST00000484763 ZNRF2Q8NHG8 242 aa14.37□□□□□ -0.11
VCPKMT-203ENST00000484763 HSBP1O75506 76 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 GAGE12JA6NER3 117 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 LINC01546A6NGU7 62 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 PAX4O43316 350 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 GAGE1Q13065 139 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 GAGE4Q13068 117 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 GAGE5Q13069 117 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 GAGE13Q4V321 117 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 NEGR1Q7Z3B1 354 aa14.36□□□□□ -0.11
VCPKMT-203ENST00000484763 LOC100131303A0A0U1RQF7 123 aa14.35□□□□□ -0.11
VCPKMT-203ENST00000484763 I3L3M4 83 aa14.35□□□□□ -0.11
VCPKMT-203ENST00000484763 PDZD11Q5EBL8 140 aa14.35□□□□□ -0.11
VCPKMT-203ENST00000484763 KIR2DL4Q99706 377 aa14.35□□□□□ -0.11
VCPKMT-203ENST00000484763 K7EMI3 77 aa14.34□□□□□ -0.11
VCPKMT-203ENST00000484763 HIST3H2BBQ8N257 126 aa14.34□□□□□ -0.11
VCPKMT-203ENST00000484763 TRAV26-1A0A087WT03 109 aa14.34□□□□□ -0.11
VCPKMT-203ENST00000484763 TCAPO15273 167 aa14.34□□□□□ -0.11
VCPKMT-203ENST00000484763 UBE2D3P61077 147 aa14.34□□□□□ -0.11
VCPKMT-203ENST00000484763 UBE2D2P62837 147 aa14.34□□□□□ -0.11
VCPKMT-203ENST00000484763 A0A0J9YY99 117 aa14.33□□□□□ -0.12
VCPKMT-203ENST00000484763 GYPEP15421 78 aa14.33□□□□□ -0.12
VCPKMT-203ENST00000484763 VSIG2Q96IQ7 327 aa14.33□□□□□ -0.12
VCPKMT-203ENST00000484763 LINC00694P0DN24 101 aa14.32□□□□□ -0.12
VCPKMT-203ENST00000484763 LAGE3Q14657 143 aa14.32□□□□□ -0.12
VCPKMT-203ENST00000484763 STAB2Q8WWQ8 2551 aa14.32□□□□□ -0.12
VCPKMT-203ENST00000484763 S100A2P29034 98 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 ORMDL2Q53FV1 153 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 DAZ4Q86SG3 579 aaKnown RBP14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 PHLDA1Q8WV24 401 aaPredicted RBP14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 DAZ3Q9NR90 486 aaKnown RBP14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 DEFB131BA0A096LNP1 70 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 IGHV1-24A0A0C4DH33 117 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 FCER1GP30273 86 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 AMTP48728 403 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 FAM19A2Q8N3H0 131 aa14.31□□□□□ -0.12
VCPKMT-203ENST00000484763 IGHV3-38A0A0C4DH36 116 aa14.3□□□□□ -0.12
VCPKMT-203ENST00000484763 TSHBP01222 138 aa14.3□□□□□ -0.12
VCPKMT-203ENST00000484763 PMCHL1Q16048 86 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms