RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 FLNCQ14315 2725 aa14.55□□□□□ -0.08
LIMS2-215ENST00000484252 TGFAP01135 160 aa14.54□□□□□ -0.08
LIMS2-215ENST00000484252 HOXD3P31249 432 aaPredicted RBP14.54□□□□□ -0.08
LIMS2-215ENST00000484252 LYRM7Q5U5X0 104 aa14.54□□□□□ -0.08
LIMS2-215ENST00000484252 ZNRF2Q8NHG8 242 aa14.54□□□□□ -0.08
LIMS2-215ENST00000484252 CDIP1Q9H305 208 aa14.54□□□□□ -0.08
LIMS2-215ENST00000484252 I3L3M4 83 aa14.54□□□□□ -0.08
LIMS2-215ENST00000484252 NRGNQ92686 78 aa14.54□□□□□ -0.08
LIMS2-215ENST00000484252 TSPAN13O95857 204 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 Q6YL49 198 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 DEFB104AQ8WTQ1 72 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 ZNF702PQ9H963 129 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 EDA2RQ9HAV5 297 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 SPG11Q96JI7 2443 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 C20orf203Q8NBC4 194 aa14.53□□□□□ -0.08
LIMS2-215ENST00000484252 USP9XQ93008 2570 aaPredicted RBP14.52□□□□□ -0.08
LIMS2-215ENST00000484252 SLC25A29Q8N8R3 303 aa14.52□□□□□ -0.09
LIMS2-215ENST00000484252 J3QQQ9 107 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 FSHBP01225 129 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 P0DMU3 169 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 FAM231AP0DMU4 169 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 FAM231CP0DMU5 169 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 LGALS3P17931 250 aaKnown RBP14.51□□□□□ -0.09
LIMS2-215ENST00000484252 TSPEAR-AS2P59090 65 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 ERG28Q9UKR5 140 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 CELSR2Q9HCU4 2923 aa14.51□□□□□ -0.09
LIMS2-215ENST00000484252 Q6ZUT4 128 aa14.5□□□□□ -0.09
LIMS2-215ENST00000484252 PPDPFLQ8WWR9 84 aa14.5□□□□□ -0.09
LIMS2-215ENST00000484252 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.5□□□□□ -0.09
LIMS2-215ENST00000484252 LEPROTO15243 131 aa14.5□□□□□ -0.09
LIMS2-215ENST00000484252 DUX5Q96PT3 197 aa14.5□□□□□ -0.09
LIMS2-215ENST00000484252 AMELXQ99217 191 aa14.5□□□□□ -0.09
LIMS2-215ENST00000484252 TMEM223A0PJW6 202 aa14.49□□□□□ -0.09
LIMS2-215ENST00000484252 A8MTW9 85 aa14.49□□□□□ -0.09
LIMS2-215ENST00000484252 IGHV3-30P01768 117 aa14.49□□□□□ -0.09
LIMS2-215ENST00000484252 IGHV3-30-5P0DP03 117 aa14.49□□□□□ -0.09
LIMS2-215ENST00000484252 TRAV2A0A0B4J234 112 aa14.48□□□□□ -0.09
LIMS2-215ENST00000484252 NDUFA11Q86Y39 141 aa14.48□□□□□ -0.09
LIMS2-215ENST00000484252 MAP1AP78559 2803 aaPredicted RBP14.47□□□□□ -0.09
LIMS2-215ENST00000484252 UBE2D3P61077 147 aa14.47□□□□□ -0.09
LIMS2-215ENST00000484252 UBE2D2P62837 147 aa14.47□□□□□ -0.09
LIMS2-215ENST00000484252 MT-ATP8P03928 68 aa14.46□□□□□ -0.09
LIMS2-215ENST00000484252 SMCPP49901 116 aaPredicted RBP14.46□□□□□ -0.09
LIMS2-215ENST00000484252 PIK3CD-AS1Q5SR53 167 aa14.46□□□□□ -0.09
LIMS2-215ENST00000484252 TEN1Q86WV5 123 aa14.46□□□□□ -0.09
LIMS2-215ENST00000484252 PYGO1Q9Y3Y4 419 aa14.46□□□□□ -0.09
LIMS2-215ENST00000484252 IGLV4-3A0A075B6K6 122 aa14.46□□□□□ -0.09
LIMS2-215ENST00000484252 TMEM262E9PQX1 116 aa14.46□□□□□ -0.09
LIMS2-215ENST00000484252 OPRPNQ99935 248 aaPredicted RBP14.46□□□□□ -0.09
LIMS2-215ENST00000484252 TRBV20-1A0A075B6N2 111 aa14.45□□□□□ -0.1
LIMS2-215ENST00000484252 RBMY1A1P0DJD3 496 aaKnown RBP14.45□□□□□ -0.1
LIMS2-215ENST00000484252 RBMY1CP0DJD4 496 aa14.45□□□□□ -0.1
LIMS2-215ENST00000484252 ZNF22P17026 224 aaPredicted RBP14.45□□□□□ -0.1
LIMS2-215ENST00000484252 RBMY1FQ15415 496 aaKnown RBP14.45□□□□□ -0.1
LIMS2-215ENST00000484252 UTP20O75691 2785 aaKnown RBP14.45□□□□□ -0.1
LIMS2-215ENST00000484252 CRYBG3Q68DQ2 2970 aa14.45□□□□□ -0.1
LIMS2-215ENST00000484252 KNCNA6PVL3 124 aa14.45□□□□□ -0.1
LIMS2-215ENST00000484252 RHODO00212 210 aa14.45□□□□□ -0.1
LIMS2-215ENST00000484252 DEFB131AP59861 70 aa14.45□□□□□ -0.1
LIMS2-215ENST00000484252 LOC107984156A0A0G2JMH3 177 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 A8MWV9 139 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 IGHV4-31P0DP07 118 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 XGP55808 180 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 ARL17AQ8IVW1 177 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 MAPK1IP1LQ8NDC0 245 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 PTH2Q96A98 100 aa14.44□□□□□ -0.1
LIMS2-215ENST00000484252 H3BMM0 161 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 CFC1BP0CG36 223 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 CFC1P0CG37 223 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 PSMB2P49721 201 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 PEMTQ9UBM1 199 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 M0R2P5 195 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 SLURP1P55000 103 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 Q8N2B8 174 aa14.43□□□□□ -0.1
LIMS2-215ENST00000484252 ACACBO00763 2458 aa14.42□□□□□ -0.1
LIMS2-215ENST00000484252 C10orf126Q8N4M7 172 aa14.42□□□□□ -0.1
LIMS2-215ENST00000484252 ANAPC13Q9BS18 74 aa14.42□□□□□ -0.1
LIMS2-215ENST00000484252 BEX4Q9NWD9 120 aaPredicted RBP14.42□□□□□ -0.1
LIMS2-215ENST00000484252 ZNF415Q09FC8 603 aa14.42□□□□□ -0.1
LIMS2-215ENST00000484252 SBSPONQ8IVN8 264 aa14.42□□□□□ -0.1
LIMS2-215ENST00000484252 PRO1854Q9UHT4 67 aa14.42□□□□□ -0.1
LIMS2-215ENST00000484252 A0A0J9YXV3 536 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 GAGE5Q13069 117 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 GAGE6Q13070 117 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 ZFAND6Q6FIF0 208 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 RNF183Q96D59 192 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 DUX3Q96PT4 197 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 TNFRSF18Q9Y5U5 241 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 CSPG4Q6UVK1 2322 aa14.41□□□□□ -0.1
LIMS2-215ENST00000484252 MYO18BQ8IUG5 2567 aa14.4□□□□□ -0.1
LIMS2-215ENST00000484252 CD28P10747 220 aa14.4□□□□□ -0.1
LIMS2-215ENST00000484252 LINC00467Q9BRT7 94 aa14.4□□□□□ -0.1
LIMS2-215ENST00000484252 RBMY1BA6NDE4 496 aaKnown RBP14.39□□□□□ -0.11
LIMS2-215ENST00000484252 RBMY1EA6NEQ0 496 aaKnown RBP14.39□□□□□ -0.11
LIMS2-215ENST00000484252 PRB1P04280 392 aa14.39□□□□□ -0.11
LIMS2-215ENST00000484252 RBMY1DP0C7P1 496 aaKnown RBP14.39□□□□□ -0.11
LIMS2-215ENST00000484252 HTN1P15515 57 aa14.39□□□□□ -0.11
LIMS2-215ENST00000484252 FHL3Q13643 280 aa14.39□□□□□ -0.11
LIMS2-215ENST00000484252 TEX29Q8N6K0 151 aa14.39□□□□□ -0.11
LIMS2-215ENST00000484252 CARD19Q96LW7 228 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms