RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 RNASE8Q8TDE3 154 aaKnown RBP19.01■□□□□ 0.63
SHOX2-204ENST00000483851 SMIM2Q9BVW6 85 aa19.01■□□□□ 0.63
SHOX2-204ENST00000483851 CSTL1Q9H114 145 aa19.01■□□□□ 0.63
SHOX2-204ENST00000483851 SUMO4Q6EEV6 95 aa19.01■□□□□ 0.63
SHOX2-204ENST00000483851 EDA2RQ9HAV5 297 aa19.01■□□□□ 0.63
SHOX2-204ENST00000483851 PRM2P04554 102 aa19■□□□□ 0.63
SHOX2-204ENST00000483851 IGHV3OR16-12A0A075B7B8 117 aa18.99■□□□□ 0.63
SHOX2-204ENST00000483851 F5H697 171 aa18.99■□□□□ 0.63
SHOX2-204ENST00000483851 FAM74A4Q5TZK3 123 aa18.99■□□□□ 0.63
SHOX2-204ENST00000483851 COX8AP10176 69 aa18.99■□□□□ 0.63
SHOX2-204ENST00000483851 AZU1P20160 251 aa18.99■□□□□ 0.63
SHOX2-204ENST00000483851 TRBV6-5A0A0K0K1A5 114 aa18.98■□□□□ 0.63
SHOX2-204ENST00000483851 C16orf74Q96GX8 76 aa18.98■□□□□ 0.63
SHOX2-204ENST00000483851 HINT1P49773 126 aaPredicted RBP18.97■□□□□ 0.63
SHOX2-204ENST00000483851 LAGE3Q14657 143 aa18.97■□□□□ 0.63
SHOX2-204ENST00000483851 ZNF56Q15929 161 aa18.97■□□□□ 0.63
SHOX2-204ENST00000483851 RPL39LQ96EH5 51 aaKnown RBP18.97■□□□□ 0.63
SHOX2-204ENST00000483851 RHODO00212 210 aa18.97■□□□□ 0.63
SHOX2-204ENST00000483851 ANKRD39Q53RE8 183 aa18.97■□□□□ 0.63
SHOX2-204ENST00000483851 ZMAT4Q9H898 229 aa18.97■□□□□ 0.63
SHOX2-204ENST00000483851 H7C1H1 209 aa18.96■□□□□ 0.63
SHOX2-204ENST00000483851 C18orf15Q96N68 181 aa18.96■□□□□ 0.63
SHOX2-204ENST00000483851 VWFP04275 2813 aa18.95■□□□□ 0.62
SHOX2-204ENST00000483851 M0QY20 66 aa18.95■□□□□ 0.62
SHOX2-204ENST00000483851 DAZ2Q13117 558 aaKnown RBP18.95■□□□□ 0.62
SHOX2-204ENST00000483851 UFSP1Q6NVU6 142 aa18.95■□□□□ 0.62
SHOX2-204ENST00000483851 KIR2DL5BQ8NHK3 375 aa18.95■□□□□ 0.62
SHOX2-204ENST00000483851 FGF6P10767 208 aa18.94■□□□□ 0.62
SHOX2-204ENST00000483851 ODF1Q14990 250 aa18.94■□□□□ 0.62
SHOX2-204ENST00000483851 DKK2Q9UBU2 259 aa18.94■□□□□ 0.62
SHOX2-204ENST00000483851 NOTCH3Q9UM47 2321 aa18.94■□□□□ 0.62
SHOX2-204ENST00000483851 RS1O15537 224 aa18.93■□□□□ 0.62
SHOX2-204ENST00000483851 RRN3P1Q2M238 152 aa18.93■□□□□ 0.62
SHOX2-204ENST00000483851 ORMDL2Q53FV1 153 aa18.93■□□□□ 0.62
SHOX2-204ENST00000483851 CFAP126Q5VTH2 177 aa18.93■□□□□ 0.62
SHOX2-204ENST00000483851 ZNF25P17030 456 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-204ENST00000483851 POLR2KP53803 58 aaKnown RBP18.92■□□□□ 0.62
SHOX2-204ENST00000483851 ZFP2Q6ZN57 461 aa18.92■□□□□ 0.62
SHOX2-204ENST00000483851 C2orf91Q6ZV80 131 aa18.92■□□□□ 0.62
SHOX2-204ENST00000483851 MRPL16Q9NX20 251 aaKnown RBP18.91■□□□□ 0.62
SHOX2-204ENST00000483851 VCYO14598 125 aa18.9■□□□□ 0.62
SHOX2-204ENST00000483851 ATP5LO75964 103 aa18.9■□□□□ 0.62
SHOX2-204ENST00000483851 APOC4P55056 127 aa18.9■□□□□ 0.62
SHOX2-204ENST00000483851 MPV17L2Q567V2 206 aa18.9■□□□□ 0.62
SHOX2-204ENST00000483851 G0S2P27469 103 aa18.89■□□□□ 0.61
SHOX2-204ENST00000483851 GAGE1Q13065 139 aa18.89■□□□□ 0.61
SHOX2-204ENST00000483851 OVOL2Q9BRP0 275 aa18.89■□□□□ 0.61
SHOX2-204ENST00000483851 TRBV27A0A0K0K1C4 114 aa18.88■□□□□ 0.61
SHOX2-204ENST00000483851 SMIM9A6NGZ8 99 aa18.88■□□□□ 0.61
SHOX2-204ENST00000483851 BOD1L2Q8IYS8 172 aa18.88■□□□□ 0.61
SHOX2-204ENST00000483851 PLAC8L1A1L4L8 177 aa18.88■□□□□ 0.61
SHOX2-204ENST00000483851 HHLA3Q9XRX5 114 aa18.88■□□□□ 0.61
SHOX2-204ENST00000483851 TRGV1A0A0A0MS02 117 aa18.87■□□□□ 0.61
SHOX2-204ENST00000483851 SDHAF1A6NFY7 115 aa18.87■□□□□ 0.61
SHOX2-204ENST00000483851 LINC01549A6NIU2 74 aa18.87■□□□□ 0.61
SHOX2-204ENST00000483851 DLEU1O43261 78 aa18.87■□□□□ 0.61
SHOX2-204ENST00000483851 BVES-AS1Q5T3Y7 98 aa18.87■□□□□ 0.61
SHOX2-204ENST00000483851 CIDEAO60543 219 aa18.86■□□□□ 0.61
SHOX2-204ENST00000483851 NUDT3O95989 172 aa18.86■□□□□ 0.61
SHOX2-204ENST00000483851 PRSS1P07477 247 aa18.86■□□□□ 0.61
SHOX2-204ENST00000483851 KIR2DL4Q99706 377 aa18.86■□□□□ 0.61
SHOX2-204ENST00000483851 IGHV3-53P01767 116 aa18.86■□□□□ 0.61
SHOX2-204ENST00000483851 NACAE9PAV3 2078 aa18.85■□□□□ 0.61
SHOX2-204ENST00000483851 TRAV4A0A0B4J268 109 aa18.84■□□□□ 0.61
SHOX2-204ENST00000483851 EGFEM1PQ0D2K5 195 aa18.84■□□□□ 0.61
SHOX2-204ENST00000483851 OR4C5Q8NGB2 326 aa18.84■□□□□ 0.61
SHOX2-204ENST00000483851 TOMM6Q96B49 74 aa18.84■□□□□ 0.61
SHOX2-204ENST00000483851 NOP10Q9NPE3 64 aaKnown RBP18.84■□□□□ 0.61
SHOX2-204ENST00000483851 FBN1P35555 2871 aaKnown RBP18.83■□□□□ 0.6
SHOX2-204ENST00000483851 DNAJC30Q96LL9 226 aa18.83■□□□□ 0.6
SHOX2-204ENST00000483851 Q6ZTI0 123 aa18.82■□□□□ 0.6
SHOX2-204ENST00000483851 IGKCP01834 107 aa18.82■□□□□ 0.6
SHOX2-204ENST00000483851 IGHV3-73A0A0B4J1V6 119 aa18.81■□□□□ 0.6
SHOX2-204ENST00000483851 DPM2O94777 84 aa18.81■□□□□ 0.6
SHOX2-204ENST00000483851 ORAOV1Q8WV07 137 aa18.81■□□□□ 0.6
SHOX2-204ENST00000483851 A0A087WX48 190 aa18.8■□□□□ 0.6
SHOX2-204ENST00000483851 SIVA1O15304 175 aa18.8■□□□□ 0.6
SHOX2-204ENST00000483851 OXLD1Q5BKU9 147 aa18.8■□□□□ 0.6
SHOX2-204ENST00000483851 TRAV12-1A0A0B4J245 112 aa18.8■□□□□ 0.6
SHOX2-204ENST00000483851 COX11Q9Y6N1 276 aa18.8■□□□□ 0.6
SHOX2-204ENST00000483851 I3L3M4 83 aa18.79■□□□□ 0.6
SHOX2-204ENST00000483851 X6R8D5 127 aa18.79■□□□□ 0.6
SHOX2-204ENST00000483851 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.78■□□□□ 0.6
SHOX2-204ENST00000483851 RHOHQ15669 191 aa18.78■□□□□ 0.6
SHOX2-204ENST00000483851 MRPL35Q9NZE8 188 aaKnown RBP18.78■□□□□ 0.6
SHOX2-204ENST00000483851 TNFRSF18Q9Y5U5 241 aa18.78■□□□□ 0.6
SHOX2-204ENST00000483851 IGHV4-30-4P0DP06 118 aa18.77■□□□□ 0.6
SHOX2-204ENST00000483851 PCP2Q8IVA1 136 aa18.77■□□□□ 0.6
SHOX2-204ENST00000483851 RIPPLY3P57055 190 aa18.77■□□□□ 0.6
SHOX2-204ENST00000483851 Q6ZSN1 163 aa18.77■□□□□ 0.6
SHOX2-204ENST00000483851 A8MZ25 164 aa18.76■□□□□ 0.59
SHOX2-204ENST00000483851 NPSP0C0P6 89 aa18.76■□□□□ 0.59
SHOX2-204ENST00000483851 C2orf66Q6UXQ4 117 aa18.76■□□□□ 0.59
SHOX2-204ENST00000483851 Q6ZVH6 145 aa18.76■□□□□ 0.59
SHOX2-204ENST00000483851 IGKV2D-26A0A0A0MRZ7 120 aa18.75■□□□□ 0.59
SHOX2-204ENST00000483851 NEGR1Q7Z3B1 354 aa18.75■□□□□ 0.59
SHOX2-204ENST00000483851 CYSLTR1Q9Y271 337 aa18.75■□□□□ 0.59
SHOX2-204ENST00000483851 TRBV10-1A0A0K0K1A3 114 aa18.75■□□□□ 0.59
SHOX2-204ENST00000483851 TCTAP57738 103 aa18.75■□□□□ 0.59
SHOX2-204ENST00000483851 ZNF479Q96JC4 524 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms