RNA–Protein interactions for RNA: ENST00000482961.1

GTDC1-216, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 1 (best)

Gene GTDC1, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-216ENST00000482961 TROQ12816 1431 aaPredicted RBP-1.6□□□□□ -2.67
GTDC1-216ENST00000482961 DOCK1Q14185 1865 aa-1.6□□□□□ -2.67
GTDC1-216ENST00000482961 FAM186AA6NE01 2351 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 DLC1Q96QB1 1528 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 USP54Q70EL1 1684 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 NCAPD3P42695 1498 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 SNAPC4Q5SXM2 1469 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 KDM3BQ7LBC6 1761 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 TMEM114B3SHH9 223 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 SDC2P34741 201 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 TMED2Q15363 201 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 AKR1C8PQ5T2L2 129 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 DYNLRB2Q8TF09 96 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 SMIM4Q8WVI0 70 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 UHRF1BP1Q6BDS2 1440 aa-1.61□□□□□ -2.67
GTDC1-216ENST00000482961 ADGRB1O14514 1584 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CCDC144AA2RUR9 1427 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CD109Q6YHK3 1445 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 TRAV2A0A0B4J234 112 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 TRAV13-1A0A0B4J241 112 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CTXND1A0A1B0GTU2 59 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 PNMA8CA0A1B0GUJ8 204 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 HSBP1L1C9JCN9 74 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 HBDP02042 147 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CRYGSP22914 178 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 LIN52Q52LA3 116 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CNPY4Q8N129 248 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 NUP35Q8NFH5 326 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CARD19Q96LW7 228 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CCDC42Q96M95 316 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 C9orf16Q9BUW7 83 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 UFC1Q9Y3C8 167 aa-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 XIRP1Q702N8 1843 aaKnown RBP-1.62□□□□□ -2.67
GTDC1-216ENST00000482961 CAMSAP2Q08AD1 1489 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 NUP210LQ5VU65 1888 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 PHIPQ8WWQ0 1821 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 TRAPPC8Q9Y2L5 1435 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 PGRMC1O00264 195 aaKnown RBP-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 PITX3O75364 302 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 MRPS15P82914 257 aaKnown RBP-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 PLGLB1Q02325 96 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 TMEM170BQ5T4T1 132 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 STX19Q8N4C7 294 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 VSTM2AQ8TAG5 236 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 AMELXQ99217 191 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 PRNDQ9UKY0 176 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 GAPVD1Q14C86 1478 aa-1.63□□□□□ -2.67
GTDC1-216ENST00000482961 CFAP46Q8IYW2 2715 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 DNAH7Q8WXX0 4024 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 GABARAPH6UMI1 98 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 M0R135 149 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 RPP14O95059 124 aaKnown RBP-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 CYBAP13498 195 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 SRP9P49458 86 aaKnown RBP-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 MAGOHP61326 146 aaKnown RBP-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 SPA17Q15506 151 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 ALX1Q15699 326 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 NAA60Q9H7X0 242 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 COL6A5A8TX70 2615 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 KIF13AQ9H1H9 1805 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 POLA1P09884 1462 aaPredicted RBP-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 C5orf42Q9H799 3197 aa-1.64□□□□□ -2.67
GTDC1-216ENST00000482961 CCDC171Q6TFL3 1326 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 REV3LO60673 3130 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 H0YAA0 97 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 CCDC179H3BU77 68 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 M0QZK8 103 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 RPS17P08708 135 aaKnown RBP-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 COTL1Q14019 142 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 LTC4SQ16873 150 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 HSD17B12Q53GQ0 312 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 C9orf116Q5BN46 136 aaPredicted RBP-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 SNX29P2Q8IUI4 249 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 USMG5Q96IX5 58 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 NOP16Q9Y3C1 178 aaKnown RBP-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 R4GMQ9 66 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 PDE4DIPQ5VU43 2346 aa-1.65□□□□□ -2.67
GTDC1-216ENST00000482961 FAM135BQ49AJ0 1406 aa-1.66□□□□□ -2.67
GTDC1-216ENST00000482961 IFT172Q9UG01 1749 aa-1.66□□□□□ -2.67
GTDC1-216ENST00000482961 C9orf92A6NGG3 77 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 SMIM23A6NLE4 172 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 F8VRH5 84 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 K7EP34 96 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 RPL7L1Q6DKI1 246 aaKnown RBP-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 SH3BGRL3Q9H299 93 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 RPRMQ9NS64 109 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 LYRM2Q9NU23 88 aaPredicted RBP-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 NKIRAS1Q9NYS0 192 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 STOML2Q9UJZ1 356 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 RELNP78509 3460 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 TRIOO75962 3097 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 SLIT1O75093 1534 aa-1.66□□□□□ -2.68
GTDC1-216ENST00000482961 PIK3C2AO00443 1686 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 LRBAP50851 2863 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 TRDV1A0A1B0GX56 115 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 CLPSL1A2RUU4 121 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 A6NIN4 97 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 UQCRQO14949 82 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 PPP1R17O96001 155 aa-1.67□□□□□ -2.68
GTDC1-216ENST00000482961 SLC25A5P05141 298 aaKnown RBP-1.67□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms