RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 TMEM136Q6ZRR5 245 aa16.13■□□□□ 0.17
SHISA4-203ENST00000481699 GNB1LQ9BYB4 327 aa16.13■□□□□ 0.17
SHISA4-203ENST00000481699 TNFRSF18Q9Y5U5 241 aa16.13■□□□□ 0.17
SHISA4-203ENST00000481699 LOC100131303A0A0U1RQF7 123 aa16.12■□□□□ 0.17
SHISA4-203ENST00000481699 MT-ND6P03923 174 aa16.12■□□□□ 0.17
SHISA4-203ENST00000481699 CKS2P33552 79 aa16.12■□□□□ 0.17
SHISA4-203ENST00000481699 TCTAP57738 103 aa16.12■□□□□ 0.17
SHISA4-203ENST00000481699 MRPL51Q4U2R6 128 aaKnown RBP16.12■□□□□ 0.17
SHISA4-203ENST00000481699 APCSP02743 223 aa16.11■□□□□ 0.17
SHISA4-203ENST00000481699 SH2D6Q7Z4S9 175 aa16.11■□□□□ 0.17
SHISA4-203ENST00000481699 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.11■□□□□ 0.17
SHISA4-203ENST00000481699 DNAJC30Q96LL9 226 aa16.11■□□□□ 0.17
SHISA4-203ENST00000481699 PPP1R17O96001 155 aa16.1■□□□□ 0.17
SHISA4-203ENST00000481699 ZNRF2Q8NHG8 242 aa16.1■□□□□ 0.17
SHISA4-203ENST00000481699 YPEL4Q96NS1 127 aa16.1■□□□□ 0.17
SHISA4-203ENST00000481699 NIT2Q9NQR4 276 aa16.1■□□□□ 0.17
SHISA4-203ENST00000481699 TRBV7-3A0A075B6L6 115 aa16.09■□□□□ 0.17
SHISA4-203ENST00000481699 SMKR1H3BMG3 65 aa16.09■□□□□ 0.17
SHISA4-203ENST00000481699 NCR2O95944 276 aa16.09■□□□□ 0.17
SHISA4-203ENST00000481699 PPBPP02775 128 aa16.09■□□□□ 0.17
SHISA4-203ENST00000481699 OR10J3Q5JRS4 329 aa16.09■□□□□ 0.17
SHISA4-203ENST00000481699 NEXN-AS1Q8NBZ9 246 aa16.09■□□□□ 0.17
SHISA4-203ENST00000481699 A0A096LPF7 62 aa16.08■□□□□ 0.16
SHISA4-203ENST00000481699 CASC10Q5T4H9 136 aa16.08■□□□□ 0.16
SHISA4-203ENST00000481699 TRAPPC1Q9Y5R8 145 aa16.08■□□□□ 0.16
SHISA4-203ENST00000481699 D6R8Y8 96 aa16.07■□□□□ 0.16
SHISA4-203ENST00000481699 FABP9Q0Z7S8 132 aa16.07■□□□□ 0.16
SHISA4-203ENST00000481699 NEGR1Q7Z3B1 354 aa16.07■□□□□ 0.16
SHISA4-203ENST00000481699 ORMDL3Q8N138 153 aa16.07■□□□□ 0.16
SHISA4-203ENST00000481699 MRPL18Q9H0U6 180 aaKnown RBP16.07■□□□□ 0.16
SHISA4-203ENST00000481699 ATP6V0E2Q8NHE4 81 aa16.06■□□□□ 0.16
SHISA4-203ENST00000481699 RPL39LQ96EH5 51 aaKnown RBP16.06■□□□□ 0.16
SHISA4-203ENST00000481699 Q9UF83 564 aa16.06■□□□□ 0.16
SHISA4-203ENST00000481699 APLNQ9ULZ1 77 aa16.06■□□□□ 0.16
SHISA4-203ENST00000481699 DNAH7Q8WXX0 4024 aa16.06■□□□□ 0.16
SHISA4-203ENST00000481699 PRELID3AQ96N28 172 aa16.05■□□□□ 0.16
SHISA4-203ENST00000481699 ST20Q9HBF5 79 aa16.05■□□□□ 0.16
SHISA4-203ENST00000481699 RPS10P46783 165 aaKnown RBP16.03■□□□□ 0.16
SHISA4-203ENST00000481699 UBE2D3P61077 147 aa16.03■□□□□ 0.16
SHISA4-203ENST00000481699 UBE2D2P62837 147 aa16.03■□□□□ 0.16
SHISA4-203ENST00000481699 GAS8-AS1O95177 125 aa16.02■□□□□ 0.16
SHISA4-203ENST00000481699 KIAA1644Q3SXP7 199 aa16.02■□□□□ 0.16
SHISA4-203ENST00000481699 DAZ4Q86SG3 579 aaKnown RBP16.02■□□□□ 0.16
SHISA4-203ENST00000481699 DAZ3Q9NR90 486 aaKnown RBP16.02■□□□□ 0.16
SHISA4-203ENST00000481699 TRBV6-5A0A0K0K1A5 114 aa16.01■□□□□ 0.15
SHISA4-203ENST00000481699 COLCA2A8K830 154 aa16.01■□□□□ 0.15
SHISA4-203ENST00000481699 TNFRSF6BO95407 300 aa16.01■□□□□ 0.15
SHISA4-203ENST00000481699 CCL18P55774 89 aa16.01■□□□□ 0.15
SHISA4-203ENST00000481699 NRACQ8N912 160 aa16.01■□□□□ 0.15
SHISA4-203ENST00000481699 LAMTOR2Q9Y2Q5 125 aa16.01■□□□□ 0.15
SHISA4-203ENST00000481699 PHOX2AO14813 284 aa16■□□□□ 0.15
SHISA4-203ENST00000481699 LINC00694P0DN24 101 aa16■□□□□ 0.15
SHISA4-203ENST00000481699 RAB5AP20339 215 aa16■□□□□ 0.15
SHISA4-203ENST00000481699 UBE2DNLQ8IWF7 75 aa16■□□□□ 0.15
SHISA4-203ENST00000481699 GTSF1LQ9H1H1 148 aa16■□□□□ 0.15
SHISA4-203ENST00000481699 IGHV3-38A0A0C4DH36 116 aa15.99■□□□□ 0.15
SHISA4-203ENST00000481699 SDHAF1A6NFY7 115 aa15.99■□□□□ 0.15
SHISA4-203ENST00000481699 SUMO2P61956 95 aaKnown RBP15.99■□□□□ 0.15
SHISA4-203ENST00000481699 C20orf78Q9BR46 151 aa15.99■□□□□ 0.15
SHISA4-203ENST00000481699 NPYP01303 97 aa15.98■□□□□ 0.15
SHISA4-203ENST00000481699 PMCHP20382 165 aa15.98■□□□□ 0.15
SHISA4-203ENST00000481699 TMEM97Q5BJF2 176 aa15.98■□□□□ 0.15
SHISA4-203ENST00000481699 LYPD5Q6UWN5 251 aa15.97■□□□□ 0.15
SHISA4-203ENST00000481699 MAP1LC3AQ9H492 121 aa15.97■□□□□ 0.15
SHISA4-203ENST00000481699 VCYO14598 125 aa15.96■□□□□ 0.15
SHISA4-203ENST00000481699 COTL1Q14019 142 aa15.96■□□□□ 0.15
SHISA4-203ENST00000481699 ESRGQ1W209 222 aa15.96■□□□□ 0.15
SHISA4-203ENST00000481699 TMEM70Q9BUB7 260 aa15.96■□□□□ 0.15
SHISA4-203ENST00000481699 I3L3M4 83 aa15.95■□□□□ 0.14
SHISA4-203ENST00000481699 TIRAPP58753 221 aa15.95■□□□□ 0.14
SHISA4-203ENST00000481699 LOC389332A0A1B0GUA5 103 aa15.94■□□□□ 0.14
SHISA4-203ENST00000481699 KIR2DL4Q99706 377 aa15.94■□□□□ 0.14
SHISA4-203ENST00000481699 ALKBH7Q9BT30 221 aaPredicted RBP15.94■□□□□ 0.14
SHISA4-203ENST00000481699 FCER1GP30273 86 aa15.93■□□□□ 0.14
SHISA4-203ENST00000481699 SMIM2Q9BVW6 85 aa15.93■□□□□ 0.14
SHISA4-203ENST00000481699 EPPK1P58107 5090 aaKnown RBP15.93■□□□□ 0.14
SHISA4-203ENST00000481699 DYNC2H1Q8NCM8 4307 aaKnown RBP15.92■□□□□ 0.14
SHISA4-203ENST00000481699 TRAV8-6A0A0B4J262 113 aa15.92■□□□□ 0.14
SHISA4-203ENST00000481699 TRGC2P03986 189 aa15.92■□□□□ 0.14
SHISA4-203ENST00000481699 POLR2KP53803 58 aaKnown RBP15.92■□□□□ 0.14
SHISA4-203ENST00000481699 LELP1Q5T871 98 aa15.92■□□□□ 0.14
SHISA4-203ENST00000481699 BIRC6Q9NR09 4857 aa15.92■□□□□ 0.14
SHISA4-203ENST00000481699 RYR2Q92736 4967 aa15.92■□□□□ 0.14
SHISA4-203ENST00000481699 TRBV27A0A0K0K1C4 114 aa15.91■□□□□ 0.14
SHISA4-203ENST00000481699 RPL32P62910 135 aaKnown RBP15.91■□□□□ 0.14
SHISA4-203ENST00000481699 DEFB104AQ8WTQ1 72 aa15.91■□□□□ 0.14
SHISA4-203ENST00000481699 MRPS16Q9Y3D3 137 aaKnown RBP15.91■□□□□ 0.14
SHISA4-203ENST00000481699 LINC00588Q9Y4M8 146 aa15.91■□□□□ 0.14
SHISA4-203ENST00000481699 STARD9Q9P2P6 4700 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 TRBV25-1A0A075B6N4 114 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 TRBV6-8A0A0A6YYG3 113 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 IGHV1-24A0A0C4DH33 117 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 TCAPO15273 167 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 AMTP48728 403 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 CSMD3Q7Z407 3707 aa15.9■□□□□ 0.14
SHISA4-203ENST00000481699 PRSS3P2Q8NHM4 247 aa15.89■□□□□ 0.13
SHISA4-203ENST00000481699 LGALS9CQ6DKI2 356 aa15.88■□□□□ 0.13
SHISA4-203ENST00000481699 NXT2Q9NPJ8 142 aaKnown RBP15.88■□□□□ 0.13
SHISA4-203ENST00000481699 PRSS47A8MTI9 375 aa15.87■□□□□ 0.13
SHISA4-203ENST00000481699 LY6G6CO95867 125 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms