RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 K7EQD1 137 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 TNFRSF6BO95407 300 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 SUMO2P61956 95 aaKnown RBP7.2□□□□□ -1.26
USP39-215ENST00000481409 FHL2Q14192 279 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 COA6Q5JTJ3 125 aaKnown RBP7.2□□□□□ -1.26
USP39-215ENST00000481409 NRACQ8N912 160 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 ST20Q9HBF5 79 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 HHLA3Q9XRX5 114 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 NACAE9PAV3 2078 aa7.2□□□□□ -1.26
USP39-215ENST00000481409 DNHD1Q96M86 4753 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 EREGO14944 169 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 DEFB4AO15263 64 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 S100A6P06703 90 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 PMCHP20382 165 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 G0S2P27469 103 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 RPL36AP83881 106 aaKnown RBP7.19□□□□□ -1.26
USP39-215ENST00000481409 C12orf74Q32Q52 190 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 SH2D6Q7Z4S9 175 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 C18orf32Q8TCD1 76 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 RPL36ALQ969Q0 106 aaKnown RBP7.19□□□□□ -1.26
USP39-215ENST00000481409 CHCHD1Q96BP2 118 aaKnown RBP7.19□□□□□ -1.26
USP39-215ENST00000481409 CELA1Q9UNI1 258 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 TNFRSF18Q9Y5U5 241 aa7.19□□□□□ -1.26
USP39-215ENST00000481409 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 VCYO14598 125 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 NPYP01303 97 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
USP39-215ENST00000481409 SLC25A29Q8N8R3 303 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 PRSS3P2Q8NHM4 247 aa7.18□□□□□ -1.26
USP39-215ENST00000481409 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
USP39-215ENST00000481409 IGHV3-73A0A0B4J1V6 119 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 TRAV26-2A0A0B4J265 109 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 NCR2O95944 276 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 ESDP10768 282 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
USP39-215ENST00000481409 CRYBA4P53673 196 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
USP39-215ENST00000481409 BAGE3Q86Y29 109 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 Q8N8P6 123 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 NEXN-AS1Q8NBZ9 246 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 SMIM2Q9BVW6 85 aa7.17□□□□□ -1.26
USP39-215ENST00000481409 TRAV26-1A0A087WT03 109 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 TRAV10A0A0B4J240 114 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 SDHAF1A6NFY7 115 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 SMKR1H3BMG3 65 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 LINC00614P0C842 121 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 FA2HQ7L5A8 372 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
USP39-215ENST00000481409 TMEM70Q9BUB7 260 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
USP39-215ENST00000481409 IGLV2-18A0A075B6J9 118 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 F5H768 121 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 I3L3M4 83 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 J3QL48 77 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 PAX4O43316 350 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 HOXA5P20719 270 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 NDUFA6P56556 154 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 ORMDL2Q53FV1 153 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 Q6ZSN1 163 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 NIT1Q86X76 327 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 RPL39LQ96EH5 51 aaKnown RBP7.15□□□□□ -1.26
USP39-215ENST00000481409 GTSF1LQ9H1H1 148 aa7.15□□□□□ -1.26
USP39-215ENST00000481409 LINC00694P0DN24 101 aa7.14□□□□□ -1.27
USP39-215ENST00000481409 UBE2D3P61077 147 aa7.14□□□□□ -1.27
USP39-215ENST00000481409 UBE2D2P62837 147 aa7.14□□□□□ -1.27
USP39-215ENST00000481409 MRPL23Q16540 153 aaKnown RBP7.14□□□□□ -1.27
USP39-215ENST00000481409 Q6ZTC4 211 aa7.14□□□□□ -1.27
USP39-215ENST00000481409 ZNRF2Q8NHG8 242 aa7.14□□□□□ -1.27
USP39-215ENST00000481409 NBEAL2Q6ZNJ1 2754 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 DEFB131BA0A096LNP1 70 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 C5orf52A6NGY3 159 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 HSBP1O75506 76 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 GAS8-AS1O95177 125 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 IFI27P40305 119 aaPredicted RBP7.13□□□□□ -1.27
USP39-215ENST00000481409 SMAGPQ0VAQ4 97 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 COTL1Q14019 142 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 LAGE3Q14657 143 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 TMEM18Q96B42 140 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 ICOSQ9Y6W8 199 aa7.13□□□□□ -1.27
USP39-215ENST00000481409 LOC389332A0A1B0GUA5 103 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 SERF1AO75920 110 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 GYPEP15421 78 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 FCER1GP30273 86 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 TIRAPP58753 221 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 NANOS2P60321 138 aaKnown RBP7.12□□□□□ -1.27
USP39-215ENST00000481409 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 IQCJQ1A5X6 159 aa7.12□□□□□ -1.27
USP39-215ENST00000481409 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
USP39-215ENST00000481409 H7C423 109 aa7.11□□□□□ -1.27
USP39-215ENST00000481409 NPSP0C0P6 89 aa7.11□□□□□ -1.27
USP39-215ENST00000481409 P0DMU3 169 aa7.11□□□□□ -1.27
USP39-215ENST00000481409 FAM231AP0DMU4 169 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms