RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 HIST1H2BHQ93079 126 aa9.26□□□□□ -0.93
COL4A2-206ENST00000480609 HIST1H2BNQ99877 126 aa9.26□□□□□ -0.93
COL4A2-206ENST00000480609 HIST1H2BMQ99879 126 aa9.26□□□□□ -0.93
COL4A2-206ENST00000480609 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
COL4A2-206ENST00000480609 TRGV4A0A0C4DH28 118 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 TRBV27A0A0K0K1C4 114 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 F5H697 171 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 K7EMI3 77 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 SRIP30626 198 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 RAB5BP61020 215 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 KIAA1644Q3SXP7 199 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 NEXN-AS1Q8NBZ9 246 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 C18orf32Q8TCD1 76 aa9.25□□□□□ -0.93
COL4A2-206ENST00000480609 IGLV2-18A0A075B6J9 118 aa9.24□□□□□ -0.93
COL4A2-206ENST00000480609 TRAV26-2A0A0B4J265 109 aa9.24□□□□□ -0.93
COL4A2-206ENST00000480609 GAS8-AS1O95177 125 aa9.24□□□□□ -0.93
COL4A2-206ENST00000480609 NPYP01303 97 aa9.24□□□□□ -0.93
COL4A2-206ENST00000480609 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
COL4A2-206ENST00000480609 Q6ZTC4 211 aa9.24□□□□□ -0.93
COL4A2-206ENST00000480609 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.24□□□□□ -0.93
COL4A2-206ENST00000480609 PRADC1Q9BSG0 188 aa9.24□□□□□ -0.93
COL4A2-206ENST00000480609 COL7A1Q02388 2944 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 TRBV7-3A0A075B6L6 115 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 TRAV26-1A0A087WT03 109 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 TRAV10A0A0B4J240 114 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 SMKR1H3BMG3 65 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 TCAPO15273 167 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 VSIG2Q96IQ7 327 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 ST20Q9HBF5 79 aa9.23□□□□□ -0.93
COL4A2-206ENST00000480609 NXT2Q9NPJ8 142 aaKnown RBP9.23□□□□□ -0.93
COL4A2-206ENST00000480609 IGHV3-73A0A0B4J1V6 119 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 NCR2O95944 276 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 ESDP10768 282 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 NANOS2P60321 138 aaKnown RBP9.22□□□□□ -0.93
COL4A2-206ENST00000480609 UBE2D3P61077 147 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 UBE2D2P62837 147 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 RPL36AP83881 106 aaKnown RBP9.22□□□□□ -0.93
COL4A2-206ENST00000480609 SH2D6Q7Z4S9 175 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 RPL36ALQ969Q0 106 aaKnown RBP9.22□□□□□ -0.93
COL4A2-206ENST00000480609 RPL39LQ96EH5 51 aaKnown RBP9.22□□□□□ -0.93
COL4A2-206ENST00000480609 TMEM70Q9BUB7 260 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 SMIM2Q9BVW6 85 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
COL4A2-206ENST00000480609 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.94
COL4A2-206ENST00000480609 VCYO14598 125 aa9.21□□□□□ -0.94
COL4A2-206ENST00000480609 DAZ4Q86SG3 579 aaKnown RBP9.21□□□□□ -0.94
COL4A2-206ENST00000480609 Q8N8P6 123 aa9.21□□□□□ -0.94
COL4A2-206ENST00000480609 DAZ3Q9NR90 486 aaKnown RBP9.21□□□□□ -0.94
COL4A2-206ENST00000480609 DYNC2H1Q8NCM8 4307 aaKnown RBP9.2□□□□□ -0.94
COL4A2-206ENST00000480609 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
COL4A2-206ENST00000480609 F5H768 121 aa9.2□□□□□ -0.94
COL4A2-206ENST00000480609 PAX4O43316 350 aa9.2□□□□□ -0.94
COL4A2-206ENST00000480609 PMCHP20382 165 aa9.2□□□□□ -0.94
COL4A2-206ENST00000480609 TIRAPP58753 221 aa9.2□□□□□ -0.94
COL4A2-206ENST00000480609 CHCHD1Q96BP2 118 aaKnown RBP9.2□□□□□ -0.94
COL4A2-206ENST00000480609 TNFRSF18Q9Y5U5 241 aa9.2□□□□□ -0.94
COL4A2-206ENST00000480609 P0DMU3 169 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 FAM231AP0DMU4 169 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 FAM231CP0DMU5 169 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 MRPL23Q16540 153 aaKnown RBP9.19□□□□□ -0.94
COL4A2-206ENST00000480609 TMEM97Q5BJF2 176 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 GTSF1LQ9H1H1 148 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 Q9UF83 564 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 DNAH7Q8WXX0 4024 aa9.19□□□□□ -0.94
COL4A2-206ENST00000480609 LINC01549A6NIU2 74 aa9.18□□□□□ -0.94
COL4A2-206ENST00000480609 I3L3M4 83 aa9.18□□□□□ -0.94
COL4A2-206ENST00000480609 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
COL4A2-206ENST00000480609 LINC00614P0C842 121 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 GYPEP15421 78 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 TCTAP57738 103 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 LINC00310P59036 64 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 ZNRF2Q8NHG8 242 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 PACRGQ96M98 296 aaPredicted RBP9.17□□□□□ -0.94
COL4A2-206ENST00000480609 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 AP5S1Q9NUS5 200 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 ICOSQ9Y6W8 199 aa9.17□□□□□ -0.94
COL4A2-206ENST00000480609 G0S2P27469 103 aa9.16□□□□□ -0.94
COL4A2-206ENST00000480609 IFI27P40305 119 aaPredicted RBP9.16□□□□□ -0.94
COL4A2-206ENST00000480609 NIT1Q86X76 327 aa9.16□□□□□ -0.94
COL4A2-206ENST00000480609 PRSS3P2Q8NHM4 247 aa9.16□□□□□ -0.94
COL4A2-206ENST00000480609 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
COL4A2-206ENST00000480609 A0A096LPF7 62 aa9.15□□□□□ -0.94
COL4A2-206ENST00000480609 LOC100131303A0A0U1RQF7 123 aa9.15□□□□□ -0.94
COL4A2-206ENST00000480609 IQCJQ1A5X6 159 aa9.15□□□□□ -0.94
COL4A2-206ENST00000480609 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.94
COL4A2-206ENST00000480609 BAGE3Q86Y29 109 aa9.15□□□□□ -0.94
COL4A2-206ENST00000480609 GAGE12JA6NER3 117 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 C5orf52A6NGY3 159 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 SERF1AO75920 110 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 TSHBP01222 138 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 HTN3P15516 51 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 GAGE1Q13065 139 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 GAGE4Q13068 117 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 GAGE5Q13069 117 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 COTL1Q14019 142 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 FA2HQ7L5A8 372 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 NEGR1Q7Z3B1 354 aa9.14□□□□□ -0.95
COL4A2-206ENST00000480609 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms