RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SLC25A29Q8N8R3 303 aa12.4□□□□□ -0.42
UPF3A-206ENST00000480362 LOC389332A0A1B0GUA5 103 aa12.39□□□□□ -0.43
UPF3A-206ENST00000480362 K7EQD1 137 aa12.39□□□□□ -0.43
UPF3A-206ENST00000480362 HTN3P15516 51 aa12.39□□□□□ -0.43
UPF3A-206ENST00000480362 NANOS2P60321 138 aaKnown RBP12.39□□□□□ -0.43
UPF3A-206ENST00000480362 MAP1LC3AQ9H492 121 aa12.39□□□□□ -0.43
UPF3A-206ENST00000480362 Q9UF83 564 aa12.39□□□□□ -0.43
UPF3A-206ENST00000480362 HHLA3Q9XRX5 114 aa12.39□□□□□ -0.43
UPF3A-206ENST00000480362 TRBV6-4A0A1B0GX49 114 aa12.38□□□□□ -0.43
UPF3A-206ENST00000480362 F5H768 121 aa12.38□□□□□ -0.43
UPF3A-206ENST00000480362 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
UPF3A-206ENST00000480362 NEXN-AS1Q8NBZ9 246 aa12.38□□□□□ -0.43
UPF3A-206ENST00000480362 C20orf78Q9BR46 151 aa12.38□□□□□ -0.43
UPF3A-206ENST00000480362 ST20Q9HBF5 79 aa12.38□□□□□ -0.43
UPF3A-206ENST00000480362 TRBV6-5A0A0K0K1A5 114 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 PRSS47A8MTI9 375 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 SUMO2P61956 95 aaKnown RBP12.37□□□□□ -0.43
UPF3A-206ENST00000480362 Q6ZTC4 211 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 PRSS3P2Q8NHM4 247 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 DNAJC30Q96LL9 226 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 PRO0255Q9UI72 69 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
UPF3A-206ENST00000480362 TRBV10-1A0A0K0K1A3 114 aa12.36□□□□□ -0.43
UPF3A-206ENST00000480362 IFI27P40305 119 aaPredicted RBP12.36□□□□□ -0.43
UPF3A-206ENST00000480362 CRYBA4P53673 196 aa12.36□□□□□ -0.43
UPF3A-206ENST00000480362 RHOHQ15669 191 aa12.36□□□□□ -0.43
UPF3A-206ENST00000480362 NIT1Q86X76 327 aa12.36□□□□□ -0.43
UPF3A-206ENST00000480362 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
UPF3A-206ENST00000480362 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
UPF3A-206ENST00000480362 S100A6P06703 90 aa12.35□□□□□ -0.43
UPF3A-206ENST00000480362 POLR2KP53803 58 aaKnown RBP12.35□□□□□ -0.43
UPF3A-206ENST00000480362 SDHAF1A6NFY7 115 aa12.34□□□□□ -0.43
UPF3A-206ENST00000480362 PAX4O43316 350 aa12.34□□□□□ -0.43
UPF3A-206ENST00000480362 ZNRF2Q8NHG8 242 aa12.34□□□□□ -0.43
UPF3A-206ENST00000480362 URB1-AS1Q96HZ7 61 aa12.34□□□□□ -0.43
UPF3A-206ENST00000480362 TMEM70Q9BUB7 260 aa12.34□□□□□ -0.43
UPF3A-206ENST00000480362 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
UPF3A-206ENST00000480362 HUWE1Q7Z6Z7 4374 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 IGLV2-18A0A075B6J9 118 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 A0A0J9YY99 117 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 PMCHP20382 165 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 RPL36AP83881 106 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 GAGE1Q13065 139 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 GAGE4Q13068 117 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 GAGE5Q13069 117 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 COA6Q5JTJ3 125 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 Q8N8P6 123 aa12.33□□□□□ -0.44
UPF3A-206ENST00000480362 RPL36ALQ969Q0 106 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 NXT2Q9NPJ8 142 aaKnown RBP12.33□□□□□ -0.44
UPF3A-206ENST00000480362 TRBV7-3A0A075B6L6 115 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 VCYO14598 125 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 NUPR1O60356 82 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 SERF1AO75920 110 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 LINC00614P0C842 121 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 GYPEP15421 78 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 LINC00310P59036 64 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 FA2HQ7L5A8 372 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 NEGR1Q7Z3B1 354 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 VSIG2Q96IQ7 327 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 TENM3Q9P273 2699 aa12.32□□□□□ -0.44
UPF3A-206ENST00000480362 TRAV26-1A0A087WT03 109 aa12.31□□□□□ -0.44
UPF3A-206ENST00000480362 SNRPEP62304 92 aaKnown RBP12.31□□□□□ -0.44
UPF3A-206ENST00000480362 DNAH9Q9NYC9 4486 aa12.3□□□□□ -0.44
UPF3A-206ENST00000480362 DEFB131BA0A096LNP1 70 aa12.3□□□□□ -0.44
UPF3A-206ENST00000480362 TRBV27A0A0K0K1C4 114 aa12.3□□□□□ -0.44
UPF3A-206ENST00000480362 DEFB104AQ8WTQ1 72 aa12.3□□□□□ -0.44
UPF3A-206ENST00000480362 PHLDA1Q8WV24 401 aaPredicted RBP12.3□□□□□ -0.44
UPF3A-206ENST00000480362 CHCHD1Q96BP2 118 aaKnown RBP12.3□□□□□ -0.44
UPF3A-206ENST00000480362 TRAV10A0A0B4J240 114 aa12.29□□□□□ -0.44
UPF3A-206ENST00000480362 I3L3M4 83 aa12.29□□□□□ -0.44
UPF3A-206ENST00000480362 TCAPO15273 167 aa12.29□□□□□ -0.44
UPF3A-206ENST00000480362 UBE2D3P61077 147 aa12.29□□□□□ -0.44
UPF3A-206ENST00000480362 UBE2D2P62837 147 aa12.29□□□□□ -0.44
UPF3A-206ENST00000480362 IGHV3-38A0A0C4DH36 116 aa12.28□□□□□ -0.44
UPF3A-206ENST00000480362 LINC01546A6NGU7 62 aa12.28□□□□□ -0.44
UPF3A-206ENST00000480362 C5orf52A6NGY3 159 aa12.28□□□□□ -0.44
UPF3A-206ENST00000480362 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
UPF3A-206ENST00000480362 AP5S1Q9NUS5 200 aa12.28□□□□□ -0.44
UPF3A-206ENST00000480362 HSBP1O75506 76 aa12.27□□□□□ -0.45
UPF3A-206ENST00000480362 LINC00694P0DN24 101 aa12.27□□□□□ -0.45
UPF3A-206ENST00000480362 ESDP10768 282 aa12.27□□□□□ -0.45
UPF3A-206ENST00000480362 DAZ4Q86SG3 579 aaKnown RBP12.27□□□□□ -0.45
UPF3A-206ENST00000480362 DAZ3Q9NR90 486 aaKnown RBP12.27□□□□□ -0.45
UPF3A-206ENST00000480362 TSHBP01222 138 aa12.26□□□□□ -0.45
UPF3A-206ENST00000480362 LAGE3Q14657 143 aa12.26□□□□□ -0.45
UPF3A-206ENST00000480362 PDZD11Q5EBL8 140 aa12.26□□□□□ -0.45
UPF3A-206ENST00000480362 MEGF8Q7Z7M0 2845 aa12.26□□□□□ -0.45
UPF3A-206ENST00000480362 K7EMI3 77 aa12.25□□□□□ -0.45
UPF3A-206ENST00000480362 FCER1GP30273 86 aa12.25□□□□□ -0.45
UPF3A-206ENST00000480362 PMCHL1Q16048 86 aa12.25□□□□□ -0.45
UPF3A-206ENST00000480362 FAM19A2Q8N3H0 131 aa12.25□□□□□ -0.45
UPF3A-206ENST00000480362 ATP6V0E2Q8NHE4 81 aa12.25□□□□□ -0.45
UPF3A-206ENST00000480362 H3BNG1 76 aa12.24□□□□□ -0.45
UPF3A-206ENST00000480362 COTL1Q14019 142 aa12.24□□□□□ -0.45
UPF3A-206ENST00000480362 MRPL23Q16540 153 aaKnown RBP12.24□□□□□ -0.45
UPF3A-206ENST00000480362 ORMDL2Q53FV1 153 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms