RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 H7C1H1 209 aa7.49□□□□□ -1.21
LINC00173-203ENST00000480237 RS1O15537 224 aa7.49□□□□□ -1.21
LINC00173-203ENST00000480237 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
LINC00173-203ENST00000480237 OR4C5Q8NGB2 326 aa7.49□□□□□ -1.21
LINC00173-203ENST00000480237 OR11H2Q8NH07 326 aa7.49□□□□□ -1.21
LINC00173-203ENST00000480237 SMIM2Q9BVW6 85 aa7.49□□□□□ -1.21
LINC00173-203ENST00000480237 TRAV4A0A0B4J268 109 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 GAGE12BA1L429 117 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 GAGE7O76087 117 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 GAGE12FP0CL80 117 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 GAGE12GP0CL81 117 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 GAGE12IP0CL82 117 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 PMCHL1Q16048 86 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 Q6ZWC4 215 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 Q8N8P6 123 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
LINC00173-203ENST00000480237 TENM3Q9P273 2699 aa7.47□□□□□ -1.21
LINC00173-203ENST00000480237 TRGV2A0A075B6R0 118 aa7.47□□□□□ -1.21
LINC00173-203ENST00000480237 A8MZ25 164 aa7.47□□□□□ -1.21
LINC00173-203ENST00000480237 RNF183Q96D59 192 aa7.47□□□□□ -1.21
LINC00173-203ENST00000480237 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
LINC00173-203ENST00000480237 OVOL2Q9BRP0 275 aa7.47□□□□□ -1.21
LINC00173-203ENST00000480237 M0QY20 66 aa7.46□□□□□ -1.21
LINC00173-203ENST00000480237 IGHV3-53P01767 116 aa7.46□□□□□ -1.21
LINC00173-203ENST00000480237 RIPPLY3P57055 190 aa7.46□□□□□ -1.21
LINC00173-203ENST00000480237 UFSP1Q6NVU6 142 aa7.46□□□□□ -1.21
LINC00173-203ENST00000480237 ZFP2Q6ZN57 461 aa7.46□□□□□ -1.21
LINC00173-203ENST00000480237 IGHV4-28A0A0C4DH34 117 aa7.46□□□□□ -1.22
LINC00173-203ENST00000480237 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
LINC00173-203ENST00000480237 HBDP02042 147 aa7.46□□□□□ -1.22
LINC00173-203ENST00000480237 MIFP14174 115 aa7.46□□□□□ -1.22
LINC00173-203ENST00000480237 LINC00469Q8N7U9 141 aa7.46□□□□□ -1.22
LINC00173-203ENST00000480237 NIT2Q9NQR4 276 aa7.46□□□□□ -1.22
LINC00173-203ENST00000480237 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
LINC00173-203ENST00000480237 PCP4L1A6NKN8 68 aa7.45□□□□□ -1.22
LINC00173-203ENST00000480237 SMIM6P0DI80 62 aa7.45□□□□□ -1.22
LINC00173-203ENST00000480237 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
LINC00173-203ENST00000480237 EDA2RQ9HAV5 297 aa7.45□□□□□ -1.22
LINC00173-203ENST00000480237 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 LINC01546A6NGU7 62 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 DEFB4AO15263 64 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 TCAPO15273 167 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
LINC00173-203ENST00000480237 P0DMU3 169 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 FAM231AP0DMU4 169 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 FAM231CP0DMU5 169 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 DEFB130BP0DP73 79 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 DEFB130AP0DP74 79 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 KRTDAPP60985 99 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 RPL32P62910 135 aaKnown RBP7.44□□□□□ -1.22
LINC00173-203ENST00000480237 LAGE3Q14657 143 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 FAM222AQ5U5X8 452 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 Q8NAQ8 132 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 TMEM70Q9BUB7 260 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 RETNQ9HD89 108 aa7.44□□□□□ -1.22
LINC00173-203ENST00000480237 TRGV4A0A0C4DH28 118 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 LYRM9A8MSI8 78 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 K7EQD1 137 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 ORMDL2Q53FV1 153 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 Q6ZSN1 163 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 TP53TG1Q9Y2A0 90 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 TNFRSF18Q9Y5U5 241 aa7.43□□□□□ -1.22
LINC00173-203ENST00000480237 A0A096LNJ9 63 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 K7EMI3 77 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 VCYO14598 125 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 CIDEAO60543 219 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 NUDT3O95989 172 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 BTF3P20290 206 aaKnown RBP7.42□□□□□ -1.22
LINC00173-203ENST00000480237 FCER1GP30273 86 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 POLR2KP53803 58 aaKnown RBP7.42□□□□□ -1.22
LINC00173-203ENST00000480237 KPRPQ5T749 579 aaPredicted RBP7.42□□□□□ -1.22
LINC00173-203ENST00000480237 LINC00612Q8N6U2 182 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 KIR2DL4Q99706 377 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 K7EIL1 84 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 SCGB1D1O95968 90 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 PYY3Q5JQD4 70 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 DNAJC30Q96LL9 226 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 C12orf57Q99622 126 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 PLA2G2DQ9UNK4 145 aa7.42□□□□□ -1.22
LINC00173-203ENST00000480237 TRBV27A0A0K0K1C4 114 aa7.41□□□□□ -1.22
LINC00173-203ENST00000480237 C3orf79P0CE67 100 aa7.41□□□□□ -1.22
LINC00173-203ENST00000480237 DAD1P61803 113 aa7.41□□□□□ -1.22
LINC00173-203ENST00000480237 JOSD1Q15040 202 aaPredicted RBP7.41□□□□□ -1.22
LINC00173-203ENST00000480237 LINC00173Q6ZV60 143 aa7.41□□□□□ -1.22
LINC00173-203ENST00000480237 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 H0Y8G0 127 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 I3L3M4 83 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 RPL36AP83881 106 aaKnown RBP7.4□□□□□ -1.22
LINC00173-203ENST00000480237 RHOHQ15669 191 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 DEFB121Q5J5C9 76 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 SLC25A29Q8N8R3 303 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 DEFB104AQ8WTQ1 72 aa7.4□□□□□ -1.22
LINC00173-203ENST00000480237 RPL36ALQ969Q0 106 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms