RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 F8VRH5 84 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 H7C1H1 209 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 KIR2DL4Q99706 377 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 TP53TG1Q9Y2A0 90 aa9.52□□□□□ -0.88
SEC13-216ENST00000479868 TAX1BP3O14907 124 aa9.52□□□□□ -0.89
SEC13-216ENST00000479868 SIVA1O15304 175 aa9.52□□□□□ -0.89
SEC13-216ENST00000479868 PLNP26678 52 aa9.52□□□□□ -0.89
SEC13-216ENST00000479868 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
SEC13-216ENST00000479868 SMR3AQ99954 134 aa9.52□□□□□ -0.89
SEC13-216ENST00000479868 C16orf95Q9H693 158 aa9.52□□□□□ -0.89
SEC13-216ENST00000479868 CYSLTR1Q9Y271 337 aa9.52□□□□□ -0.89
SEC13-216ENST00000479868 NACAE9PAV3 2078 aa9.51□□□□□ -0.89
SEC13-216ENST00000479868 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
SEC13-216ENST00000479868 SETXQ7Z333 2677 aaKnown RBP9.51□□□□□ -0.89
SEC13-216ENST00000479868 K7EP13 123 aa9.51□□□□□ -0.89
SEC13-216ENST00000479868 TSHBP01222 138 aa9.51□□□□□ -0.89
SEC13-216ENST00000479868 IGHV3-73A0A0B4J1V6 119 aa9.5□□□□□ -0.89
SEC13-216ENST00000479868 PRSS29PA6NIE9 313 aa9.5□□□□□ -0.89
SEC13-216ENST00000479868 HIVEP2P31629 2446 aa9.5□□□□□ -0.89
SEC13-216ENST00000479868 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
SEC13-216ENST00000479868 IGIPA6NJ69 53 aa9.5□□□□□ -0.89
SEC13-216ENST00000479868 TRPT1Q86TN4 253 aaKnown RBP9.5□□□□□ -0.89
SEC13-216ENST00000479868 JMJD1CQ15652 2540 aa9.5□□□□□ -0.89
SEC13-216ENST00000479868 PROK1P58294 105 aa9.49□□□□□ -0.89
SEC13-216ENST00000479868 HSD52Q0P140 79 aa9.49□□□□□ -0.89
SEC13-216ENST00000479868 LINC01587Q99440 93 aa9.49□□□□□ -0.89
SEC13-216ENST00000479868 RIPPLY3P57055 190 aa9.49□□□□□ -0.89
SEC13-216ENST00000479868 HILS1P60008 231 aa9.49□□□□□ -0.89
SEC13-216ENST00000479868 NOTCH2Q04721 2471 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 TRAV8-6A0A0B4J262 113 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 M0R2P5 195 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 INSP01308 110 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 MAPKAPK5-AS1Q8N8E1 139 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 ZNF418Q8TF45 676 aaPredicted RBP9.48□□□□□ -0.89
SEC13-216ENST00000479868 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 P0DMU3 169 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 FAM231AP0DMU4 169 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 FAM231CP0DMU5 169 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 SEC11AP67812 179 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 UFSP1Q6NVU6 142 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 JMJD8Q96S16 334 aa9.48□□□□□ -0.89
SEC13-216ENST00000479868 SCGB2A2Q13296 93 aa9.47□□□□□ -0.89
SEC13-216ENST00000479868 STHQ8IWL8 128 aa9.47□□□□□ -0.89
SEC13-216ENST00000479868 OR11H12B2RN74 326 aa9.46□□□□□ -0.89
SEC13-216ENST00000479868 LINC01549A6NIU2 74 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 CCL25O15444 150 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 NSUN5P1Q3KNT7 163 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 TIMM17AQ99595 171 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 LINC00467Q9BRT7 94 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 CHAC1Q9BUX1 264 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 HIGD1BQ9P298 99 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 OTOGQ6ZRI0 2925 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 NOTCH3Q9UM47 2321 aa9.46□□□□□ -0.9
SEC13-216ENST00000479868 IGLV4-69A0A075B6H9 119 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 ADARB2-AS1A8MUL3 147 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 A8MWV9 139 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 I3L3M4 83 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 SAP30O75446 220 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 EMP1P54849 157 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 EDA2RQ9HAV5 297 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 Q9UF83 564 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 AZU1P20160 251 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 PMVKQ15126 192 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 CFAP126Q5VTH2 177 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 Q6ZSN1 163 aa9.45□□□□□ -0.9
SEC13-216ENST00000479868 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
SEC13-216ENST00000479868 IGHV3OR16-12A0A075B7B8 117 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 PTTG1IPP53801 180 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 UBE2V1Q13404 147 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 RHOHQ15669 191 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 PIK3CD-AS1Q5SR53 167 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
SEC13-216ENST00000479868 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 C11orf86A6NJI1 115 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 VAMP3Q15836 100 aa9.44□□□□□ -0.9
SEC13-216ENST00000479868 A6NDN8 102 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 PTH2Q96A98 100 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 NDUFA7O95182 113 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 FXYD2P54710 66 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 OR11H2Q8NH07 326 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 WFDC10AQ9H1F0 79 aa9.43□□□□□ -0.9
SEC13-216ENST00000479868 E9PLD3 99 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 LY6G6DO95868 133 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 GCSHP23434 173 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 RNF151Q2KHN1 245 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 BEAN1Q3B7T3 259 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 PRADC1Q9BSG0 188 aa9.42□□□□□ -0.9
SEC13-216ENST00000479868 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
SEC13-216ENST00000479868 ZNRF2Q8NHG8 242 aa9.41□□□□□ -0.9
SEC13-216ENST00000479868 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms