RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 C1orf229Q6ZS94 237 aaPredicted RBP4.23□□□□□ -1.73
USF3-202ENST00000478658 C5orf56Q8N8D9 126 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 RNASE8Q8TDE3 154 aaKnown RBP4.23□□□□□ -1.73
USF3-202ENST00000478658 IGHV4-4A0A075B6R2 117 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 RNF223E7ERA6 249 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 NANOS2P60321 138 aaKnown RBP4.23□□□□□ -1.73
USF3-202ENST00000478658 IGLV3-19P01714 112 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 KIAA0040Q15053 153 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 CLPSL2Q6UWE3 100 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 CLEC2BQ92478 149 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 IGKV1D-13A0A0B4J2D9 117 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 LST1O00453 97 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 LECT2O14960 151 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 TIMM17BO60830 172 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 IGKV1-13P0DP09 117 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 CELA1Q9UNI1 258 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 IGHV3-16A0A0C4DH30 117 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 IGKV3D-7A0A0C4DH55 119 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.23□□□□□ -1.73
USF3-202ENST00000478658 LOXP28300 417 aaPredicted RBP4.23□□□□□ -1.73
USF3-202ENST00000478658 TFF2Q03403 129 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 LUZP6Q538Z0 58 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 RTBDNQ9BSG5 229 aaPredicted RBP4.23□□□□□ -1.73
USF3-202ENST00000478658 TPSG1Q9NRR2 321 aa4.23□□□□□ -1.73
USF3-202ENST00000478658 CACNA1HO95180 2353 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 M0R378 163 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 C11orf71Q6IPW1 123 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 Q6ZQY7 126 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 C9orf106Q8NAJ2 232 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 C18orf32Q8TCD1 76 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 ATP6V0E1O15342 81 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 EIF4EBP1Q13541 118 aaPredicted RBP4.22□□□□□ -1.73
USF3-202ENST00000478658 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 OXLD1Q5BKU9 147 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 LRP4O75096 1905 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.22□□□□□ -1.73
USF3-202ENST00000478658 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 KLK12Q9UKR0 248 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 IGKV1D-37A0A075B6S9 117 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 A0A0U1RQS6 177 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 PRR31Q5SQ13 230 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 TNFRSF12AQ9NP84 129 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 PLA2G10O15496 165 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 PLA2G2FQ9BZM2 168 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 KIAA1549LQ6ZVL6 1849 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 CSPG4Q6UVK1 2322 aa4.22□□□□□ -1.73
USF3-202ENST00000478658 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.73
USF3-202ENST00000478658 SLC22A18ASQ8N1D0 253 aa4.21□□□□□ -1.73
USF3-202ENST00000478658 LINC01465Q8N7H1 131 aa4.21□□□□□ -1.73
USF3-202ENST00000478658 RETNLBQ9BQ08 111 aa4.21□□□□□ -1.73
USF3-202ENST00000478658 COLQQ9Y215 455 aaPredicted RBP4.21□□□□□ -1.73
USF3-202ENST00000478658 IGLV3-12A0A075B6K2 115 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 IGHV3OR16-8A0A075B7F1 116 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 A0A0J9YY99 117 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 IGHV3-33P01772 117 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 IGHV3-30-3P0DP02 117 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 Q8TAT8 98 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 LRCOL1A6NCL2 159 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 IGLV4-69A0A075B6H9 119 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 IGLC7A0M8Q6 106 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 WIPF3A6NGB9 483 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 EPOPA6NHQ4 379 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 LINC00482Q8N8I6 264 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 CTHRC1Q96CG8 243 aa4.21□□□□□ -1.74
USF3-202ENST00000478658 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
USF3-202ENST00000478658 KAAG1Q9UBP8 84 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 TRAV7A0A075B6U4 112 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 H3BPC8 53 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 HRKO00198 91 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 PRB3Q04118 309 aaPredicted RBP4.2□□□□□ -1.74
USF3-202ENST00000478658 CRYBA2P53672 197 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 FAM201AQ5SY85 155 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 PTH2Q96A98 100 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 CHCHD7Q9BUK0 85 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 CREBBPQ92793 2442 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 TMEM213A2RRL7 107 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 RPL37AP8A6NKH3 93 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 EIF4EBP3O60516 100 aaPredicted RBP4.2□□□□□ -1.74
USF3-202ENST00000478658 NDUFA7O95182 113 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 RBX1P62877 108 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 LYPD6Q86Y78 171 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 IGKV1-27A0A075B6S5 117 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 TRBV27A0A0K0K1C4 114 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 E9PLD3 99 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 CCKP06307 115 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 COL18A1P39060 1754 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 WFDC12Q8WWY7 111 aa4.2□□□□□ -1.74
USF3-202ENST00000478658 ADCYAP1P18509 176 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 IGFL3Q6UXB1 125 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 CTSZQ9UBR2 303 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 NHSL1Q5SYE7 1610 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 WISP1O95388 367 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 MT-ATP8P03928 68 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 EBI3Q14213 229 aa4.19□□□□□ -1.74
USF3-202ENST00000478658 RAI1Q7Z5J4 1906 aaPredicted RBP4.19□□□□□ -1.74
USF3-202ENST00000478658 ADAMTS20P59510 1910 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms