RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 BIRC6Q9NR09 4857 aa3.7□□□□□ -1.82
SF3B6-202ENST00000478050 A0A087WX48 190 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 C7orf71A4D174 169 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 KLLNB2CW77 178 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.69□□□□□ -1.82
SF3B6-202ENST00000478050 NXPH4O95158 308 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 PLNP26678 52 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 PSMB8P28062 276 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 RNASE4P34096 147 aaKnown RBP3.69□□□□□ -1.82
SF3B6-202ENST00000478050 RPL32P62910 135 aaKnown RBP3.69□□□□□ -1.82
SF3B6-202ENST00000478050 BLCAPP62952 87 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 DEFB113Q30KQ7 82 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 Q6YL49 198 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 ADAMTSL5Q6ZMM2 481 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 PCP2Q8IVA1 136 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 POM121L12Q8N7R1 296 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 CR1P17927 2039 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 VPS13CQ709C8 3753 aa3.69□□□□□ -1.82
SF3B6-202ENST00000478050 TRAV26-2A0A0B4J265 109 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 F8VRH5 84 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 LINC01619G3V211 115 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 H7C1H1 209 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 MGPP08493 103 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 RNASE3P12724 160 aaKnown RBP3.68□□□□□ -1.82
SF3B6-202ENST00000478050 EDN2P20800 178 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 TAL2Q16559 108 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 DEFB112Q30KQ8 113 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 ZC2HC1BQ5TFG8 222 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 AMMECR1LQ6DCA0 310 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 FAM159AQ6UWV7 190 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 Q6ZQT7 251 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 GTF2H5Q6ZYL4 71 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 C14orf178Q8N769 122 aaPredicted RBP3.68□□□□□ -1.82
SF3B6-202ENST00000478050 DCANP1Q8TF63 244 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 RASL10AQ92737 203 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 TOMM6Q96B49 74 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 MRPL35Q9NZE8 188 aaKnown RBP3.68□□□□□ -1.82
SF3B6-202ENST00000478050 HHLA3Q9XRX5 114 aa3.68□□□□□ -1.82
SF3B6-202ENST00000478050 MEGF8Q7Z7M0 2845 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 IGKV3-7A0A075B6H7 116 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 IGHV4OR15-8A0A075B7B6 117 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 A0A087WW49 117 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 A0A096LNT2 108 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 IGKV2D-26A0A0A0MRZ7 120 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 TRAV8-6A0A0B4J262 113 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 F6UB75 175 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 LGALS9O00182 355 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 GNRH2O43555 120 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 DUSP14O95147 198 aaKnown RBP3.67□□□□□ -1.82
SF3B6-202ENST00000478050 IGHV4-59P01825 116 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 LGALS1P09382 135 aaKnown RBP3.67□□□□□ -1.82
SF3B6-202ENST00000478050 SMIM13P0DJ93 91 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 DEFB1P60022 68 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 SNRPD3P62318 126 aaKnown RBP3.67□□□□□ -1.82
SF3B6-202ENST00000478050 SERTAD4-AS1Q5TG53 156 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 ERASQ7Z444 233 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 NEXN-AS1Q8NBZ9 246 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 RPL39LQ96EH5 51 aaKnown RBP3.67□□□□□ -1.82
SF3B6-202ENST00000478050 SCGB3A1Q96QR1 104 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 CHAC1Q9BUX1 264 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 VPREB3Q9UKI3 123 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 CHTOPQ9Y3Y2 248 aaKnown RBP3.67□□□□□ -1.82
SF3B6-202ENST00000478050 KIF25-AS1Q9Y6Z4 181 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 AGRNO00468 2067 aa3.67□□□□□ -1.82
SF3B6-202ENST00000478050 KMT2CQ8NEZ4 4911 aaKnown RBP3.66□□□□□ -1.82
SF3B6-202ENST00000478050 TRBV25-1A0A075B6N4 114 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 A0A0J9YX75 114 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 TRBV6-5A0A0K0K1A5 114 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 OR11H12B2RN74 326 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 K7EP34 96 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 K7EQG2 157 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 CD7P09564 240 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 SRD5A1P18405 259 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 CDKN1BP46527 198 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 TCTAP57738 103 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 LINC00315P59091 139 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 PAPPA-AS1Q5QFB9 102 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 UFSP1Q6NVU6 142 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 C2orf66Q6UXQ4 117 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 CEND1Q8N111 149 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 OR11H1Q8NG94 326 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 OR5A1Q8NGJ0 315 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 OR11H2Q8NH07 326 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 BAALCQ8WXS3 180 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 C9orf85Q96MD7 179 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 TM2D2Q9BX73 214 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 CSTL1Q9H114 145 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 CYSLTR1Q9Y271 337 aa3.66□□□□□ -1.82
SF3B6-202ENST00000478050 RYR3Q15413 4870 aa3.65□□□□□ -1.82
SF3B6-202ENST00000478050 IGHV1OR15-1A0A075B7D0 117 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 TRAV12-3A0A0B4J271 114 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 A0A1W2PPM0 123 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 A8MZ25 164 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 E9PLD3 99 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 H3BUT2 72 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 VCYO14598 125 aa3.65□□□□□ -1.83
SF3B6-202ENST00000478050 TGFAP01135 160 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms