RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ERCC8Q13216 396 aa9.54□□□□□ -0.88
RTFDC1-207ENST00000477573 BEX4Q9NWD9 120 aaPredicted RBP9.54□□□□□ -0.88
RTFDC1-207ENST00000477573 H3BTX0 84 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 IGLV2-23P01705 113 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 EEF1AKMT3Q96AZ1 226 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 AMELXQ99217 191 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 RNF5Q99942 180 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 ZNF561-AS1K7EIQ3 104 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 BUB3O43684 328 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 C8orf49Q96NF6 230 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 DPM3Q9P2X0 92 aa9.53□□□□□ -0.88
RTFDC1-207ENST00000477573 CACNA1BQ00975 2339 aa9.52□□□□□ -0.89
RTFDC1-207ENST00000477573 TRBV19A0A075B6N1 114 aa9.52□□□□□ -0.89
RTFDC1-207ENST00000477573 IGHV3-72A0A0B4J1Y9 119 aa9.52□□□□□ -0.89
RTFDC1-207ENST00000477573 FHL2Q14192 279 aa9.52□□□□□ -0.89
RTFDC1-207ENST00000477573 DCHS2Q6V1P9 2916 aa9.52□□□□□ -0.89
RTFDC1-207ENST00000477573 GATA1P15976 413 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 NSUN5P1Q3KNT7 163 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 WFDC11Q8NEX6 87 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 BRK1Q8WUW1 75 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 SMIM2Q9BVW6 85 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 INAFM2P0DMQ5 153 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 DLX1P56177 255 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 C9orf139Q6ZV77 190 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 MUSTN1Q8IVN3 82 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 IL17DQ8TAD2 202 aa9.51□□□□□ -0.89
RTFDC1-207ENST00000477573 A0A0J9YX75 114 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 KNCNA6PVL3 124 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 LGALS3P17931 250 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 Q6JHZ5 121 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 C1orf158Q8N1D5 194 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 SPTAN1Q13813 2472 aaKnown RBP9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 USP17L23D6RBM5 183 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 M0R3E3 92 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 PRB3Q04118 309 aaPredicted RBP9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 C14orf178Q8N769 122 aaPredicted RBP9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 USP24Q9UPU5 2620 aa9.5□□□□□ -0.89
RTFDC1-207ENST00000477573 DOPEY1Q5JWR5 2465 aa9.49□□□□□ -0.89
RTFDC1-207ENST00000477573 A0A0U1RQV1 116 aa9.49□□□□□ -0.89
RTFDC1-207ENST00000477573 SDHAF1A6NFY7 115 aa9.49□□□□□ -0.89
RTFDC1-207ENST00000477573 RPL27AP46776 148 aaKnown RBP9.49□□□□□ -0.89
RTFDC1-207ENST00000477573 ODF3BA8MYP8 253 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 TIRAPP58753 221 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 PMAIP1Q13794 54 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 IGLV4-69A0A075B6H9 119 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 UBE2E1P51965 193 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 TSPEAR-AS2P59090 65 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 WT1-ASQ06250 92 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 MINOS1Q5TGZ0 78 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 VMO1Q7Z5L0 202 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 MRPL36Q9P0J6 103 aaKnown RBP9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 MINOS1-NBL1R4GNA1 71 aa9.48□□□□□ -0.89
RTFDC1-207ENST00000477573 MYO18BQ8IUG5 2567 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 E7EUB6 86 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 SPRY2O43597 315 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 IGHG2P01859 326 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 ZFP36P26651 326 aaKnown RBP9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 CD164Q04900 197 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 PDE6HQ13956 83 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 CCL19Q99731 98 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 BPESC1Q9GZL8 116 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 TACC2O95359 2948 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 ARHGAP32A7KAX9 2087 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 IGHV1-69DA0A0B4J2H0 117 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 CGB1A6NKQ9 187 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 AKAP6Q13023 2319 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 PVRIGQ6DKI7 326 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 C2orf66Q6UXQ4 117 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 PSMG3-AS1Q96PY0 264 aa9.47□□□□□ -0.89
RTFDC1-207ENST00000477573 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 TMEM89A2RUT3 159 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 MRGPRG-AS1Q2M3A8 158 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 HCP5Q6MZN7 132 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 LINC00482Q8N8I6 264 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 ZNF491Q8N8L2 437 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 CLEC2BQ92478 149 aa9.46□□□□□ -0.89
RTFDC1-207ENST00000477573 FLNCQ14315 2725 aa9.46□□□□□ -0.9
RTFDC1-207ENST00000477573 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
RTFDC1-207ENST00000477573 LEPROTO15243 131 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 LMO4P61968 165 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 C17orf77Q96MU5 243 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 WNK2Q9Y3S1 2297 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 NAV3Q8IVL0 2385 aa9.45□□□□□ -0.9
RTFDC1-207ENST00000477573 USP9XQ93008 2570 aaPredicted RBP9.44□□□□□ -0.9
RTFDC1-207ENST00000477573 NPBQ8NG41 125 aa9.44□□□□□ -0.9
RTFDC1-207ENST00000477573 KLK15Q9H2R5 256 aa9.44□□□□□ -0.9
RTFDC1-207ENST00000477573 LAMTOR3Q9UHA4 124 aa9.44□□□□□ -0.9
RTFDC1-207ENST00000477573 PLXNB1O43157 2135 aa9.44□□□□□ -0.9
RTFDC1-207ENST00000477573 I3L3M4 83 aa9.43□□□□□ -0.9
RTFDC1-207ENST00000477573 PRSS2P07478 247 aa9.43□□□□□ -0.9
RTFDC1-207ENST00000477573 DYNAPQ8N1N2 210 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms