RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 M0R3E3 92 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 NDUFC1O43677 76 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 PFN2P35080 140 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 SUMO2P61956 95 aaKnown RBP3.55□□□□□ -1.84
PTCD3-212ENST00000477520 C17orf58Q2M2W7 97 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 Q6JHZ5 121 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 EXOC3-AS1Q8N2X6 119 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 DCANP1Q8TF63 244 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 SPRR3Q9UBC9 169 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 ICOSQ9Y6W8 199 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 FREM1Q5H8C1 2179 aa3.55□□□□□ -1.84
PTCD3-212ENST00000477520 FASNP49327 2511 aaKnown RBP3.54□□□□□ -1.84
PTCD3-212ENST00000477520 TRBV7-1A0A0A6YYK4 115 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 TRBV10-3A0A0K0K1G6 114 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 hADV29S1A0JD25 119 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 SMKR1H3BMG3 65 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 TIMM8AO60220 97 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-212ENST00000477520 IGHV1-69P01742 117 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 IGHG2P01859 326 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 RPL27AP46776 148 aaKnown RBP3.54□□□□□ -1.84
PTCD3-212ENST00000477520 CRIP2P52943 208 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-212ENST00000477520 FXYD7P58549 80 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 LINC00205P59089 165 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 LYZP61626 148 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 WT1-ASQ06250 92 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 C6orf226Q5I0X4 101 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF843Q8N446 348 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 CD177Q8N6Q3 437 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 KLF14Q8TD94 323 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-212ENST00000477520 UPK3BQ9BT76 320 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 TIMM21Q9BVV7 248 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 C1orf43Q9BWL3 253 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 DPH3P1Q9H4G8 78 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 TP53TG1Q9Y2A0 90 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 LRRK2Q5S007 2527 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 HCFC1P51610 2035 aa3.54□□□□□ -1.84
PTCD3-212ENST00000477520 IGKV1D-17A0A075B6S4 117 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 IGHV4OR15-8A0A075B7B6 117 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 A0A087WW49 117 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 CCL21O00585 134 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 VCYO14598 125 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 BUB3O43684 328 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 TRIAP1O43715 76 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 IGHV4-39P01824 125 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF22P17026 224 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-212ENST00000477520 SYNJ2BPP57105 145 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 ZNF876PQ49A33 203 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 C1orf195Q5TG92 126 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 ASPHD1Q5U4P2 390 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 HRCT1Q6UXD1 115 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 SEM1Q6ZVN7 128 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 APRG1Q8IVJ8 170 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 MUSTN1Q8IVN3 82 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 TMEM86BQ8N661 226 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 MBD3L2Q8NHZ7 208 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-212ENST00000477520 RNF125Q96EQ8 232 aa3.53□□□□□ -1.84
PTCD3-212ENST00000477520 ANKHD1Q8IWZ3 2542 aaKnown RBP3.53□□□□□ -1.84
PTCD3-212ENST00000477520 HEATR1Q9H583 2144 aaKnown RBP3.53□□□□□ -1.84
PTCD3-212ENST00000477520 HELZ2Q9BYK8 2649 aaKnown RBP3.53□□□□□ -1.84
PTCD3-212ENST00000477520 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 KNCNA6PVL3 124 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 LY6LH3BQJ8 138 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 COX7A2LO14548 114 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 LHBP01229 141 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 PRB1P04280 392 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV1-16P04430 117 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 GNLYP22749 145 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 CIRBPQ14011 172 aaKnown RBP3.52□□□□□ -1.85
PTCD3-212ENST00000477520 RHOHQ15669 191 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 C4orf26Q17RF5 130 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 C3orf36Q3SXR2 165 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 SUMO4Q6EEV6 95 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 FAM53AQ6NSI3 398 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-212ENST00000477520 SFTA2Q6UW10 78 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 ZNF491Q8N8L2 437 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 CNEP1R1Q8N9A8 125 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 ABCA4P78363 2273 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 PKDREJQ9NTG1 2253 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 DOPEY1Q5JWR5 2465 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 RTTNQ86VV8 2226 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 ZFHX4Q86UP3 3567 aa3.52□□□□□ -1.85
PTCD3-212ENST00000477520 DYSFO75923 2080 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 LAMA5O15230 3695 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 FLNCQ14315 2725 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 USP9XQ93008 2570 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-212ENST00000477520 IGLV4-69A0A075B6H9 119 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 TRBV6-5A0A0K0K1A5 114 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 FAM236DA0A1B0GTK5 79 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 I3L2K1 104 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 J3QKU1 62 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 IGKV3-15P01624 115 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 IGLV2-23P01705 113 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 FAM236CP0DP71 79 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 MIAQ16674 131 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 CEMP1Q6PRD7 247 aaPredicted RBP3.51□□□□□ -1.85
PTCD3-212ENST00000477520 C1orf158Q8N1D5 194 aa3.51□□□□□ -1.85
PTCD3-212ENST00000477520 RNF182Q8N6D2 247 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms