RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ADAMTSL5Q6ZMM2 481 aa8.35□□□□□ -1.07
COL27A1-204ENST00000477421 ERG28Q9UKR5 140 aa8.35□□□□□ -1.07
COL27A1-204ENST00000477421 PRM2P04554 102 aa8.35□□□□□ -1.07
COL27A1-204ENST00000477421 GTSF1LQ9H1H1 148 aa8.35□□□□□ -1.07
COL27A1-204ENST00000477421 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
COL27A1-204ENST00000477421 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
COL27A1-204ENST00000477421 CLPSL1A2RUU4 121 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 MRPS12O15235 138 aaKnown RBP8.34□□□□□ -1.07
COL27A1-204ENST00000477421 PAX2Q02962 417 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 Q8N976 141 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 CFAP46Q8IYW2 2715 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 IGKV2D-26A0A0A0MRZ7 120 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 CEND1Q8N111 149 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 ZFAND2AQ8N6M9 145 aa8.34□□□□□ -1.07
COL27A1-204ENST00000477421 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 AZU1P20160 251 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 FOXI2Q6ZQN5 318 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 GPHB5Q86YW7 130 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 RNF185Q96GF1 192 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 J3QQQ9 107 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 P0DMU3 169 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 FAM231AP0DMU4 169 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 FAM231CP0DMU5 169 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 BOD1L2Q8IYS8 172 aa8.33□□□□□ -1.08
COL27A1-204ENST00000477421 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
COL27A1-204ENST00000477421 U3KQE9 123 aa8.32□□□□□ -1.08
COL27A1-204ENST00000477421 C12orf74Q32Q52 190 aa8.32□□□□□ -1.08
COL27A1-204ENST00000477421 CEMP1Q6PRD7 247 aaPredicted RBP8.32□□□□□ -1.08
COL27A1-204ENST00000477421 LRBAP50851 2863 aa8.32□□□□□ -1.08
COL27A1-204ENST00000477421 A0A096LPF7 62 aa8.32□□□□□ -1.08
COL27A1-204ENST00000477421 CCL24O00175 119 aa8.32□□□□□ -1.08
COL27A1-204ENST00000477421 A8MWV9 139 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 RASL10AQ92737 203 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 PLEKHB2Q96CS7 222 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 DCHS1Q96JQ0 3298 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 A0A0J9YX75 114 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 A0A1B0GV72 72 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 IGHG4P01861 327 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
COL27A1-204ENST00000477421 NOP10Q9NPE3 64 aaKnown RBP8.31□□□□□ -1.08
COL27A1-204ENST00000477421 K7EP34 96 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 SPINK8P0C7L1 97 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 DLX4Q92988 240 aaPredicted RBP8.3□□□□□ -1.08
COL27A1-204ENST00000477421 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 K7EMT4 169 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 BAALCQ8WXS3 180 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 TMEM141Q96I45 108 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 TRBV7-9A0A0J9YWB2 115 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 C9JAW5 83 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 F8WDY8 70 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 M0R2P5 195 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 LINC00158P58513 81 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 USP24Q9UPU5 2620 aa8.3□□□□□ -1.08
COL27A1-204ENST00000477421 KRTAP10-9P60411 292 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 NDUFA12Q9UI09 145 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 FGF6P10767 208 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 FLNCQ14315 2725 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 RHODO00212 210 aa8.29□□□□□ -1.08
COL27A1-204ENST00000477421 FLNAP21333 2647 aaKnown RBP8.28□□□□□ -1.08
COL27A1-204ENST00000477421 SIVA1O15304 175 aa8.28□□□□□ -1.08
COL27A1-204ENST00000477421 DNAL4O96015 105 aa8.28□□□□□ -1.08
COL27A1-204ENST00000477421 SNCGO76070 127 aa8.28□□□□□ -1.08
COL27A1-204ENST00000477421 GAGE6Q13070 117 aa8.28□□□□□ -1.08
COL27A1-204ENST00000477421 DMDP11532 3685 aa8.27□□□□□ -1.08
COL27A1-204ENST00000477421 J3QKU1 62 aa8.27□□□□□ -1.09
COL27A1-204ENST00000477421 PROK1P58294 105 aa8.27□□□□□ -1.09
COL27A1-204ENST00000477421 MAPKAPK5-AS1Q8N8E1 139 aa8.27□□□□□ -1.09
COL27A1-204ENST00000477421 PIFOQ8TCI5 191 aa8.27□□□□□ -1.09
COL27A1-204ENST00000477421 CLPSL2Q6UWE3 100 aa8.27□□□□□ -1.09
COL27A1-204ENST00000477421 DAND5Q8N907 189 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 SIGMAR1Q99720 223 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 ESM1Q9NQ30 184 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 TEX48A0A1B0GUV7 120 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 K7EQG2 157 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 RNASE3P12724 160 aaKnown RBP8.26□□□□□ -1.09
COL27A1-204ENST00000477421 TRAV8-3A0A0A6YYJ7 113 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 PFN2P35080 140 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 WFDC2Q14508 124 aa8.26□□□□□ -1.09
COL27A1-204ENST00000477421 IGLL5B9A064 214 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 C1QTNF4Q9BXJ3 329 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 ZMAT4Q9H898 229 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 ITPR3Q14573 2671 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
COL27A1-204ENST00000477421 TSSC4Q9Y5U2 329 aaPredicted RBP8.25□□□□□ -1.09
COL27A1-204ENST00000477421 PAX4O43316 350 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 PSMB8P28062 276 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 C6orf226Q5I0X4 101 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 MORN3Q6PF18 240 aaPredicted RBP8.25□□□□□ -1.09
COL27A1-204ENST00000477421 NRACQ8N912 160 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 SPAG8Q99932 426 aaPredicted RBP8.25□□□□□ -1.09
COL27A1-204ENST00000477421 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
COL27A1-204ENST00000477421 U3KQK5 164 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms