RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 ZNF876PQ49A33 203 aa16.35■□□□□ 0.21
TMEM42-202ENST00000477126 CSPG4Q6UVK1 2322 aa16.35■□□□□ 0.21
TMEM42-202ENST00000477126 HERVK_113P63121 156 aa16.34■□□□□ 0.21
TMEM42-202ENST00000477126 UNQ9165/PRO28630Q6UXU0 137 aa16.34■□□□□ 0.21
TMEM42-202ENST00000477126 CSDC2Q9Y534 153 aaKnown RBP16.34■□□□□ 0.21
TMEM42-202ENST00000477126 TRAV12-2A0A075B6T6 113 aa16.34■□□□□ 0.21
TMEM42-202ENST00000477126 COX6CP09669 75 aa16.34■□□□□ 0.21
TMEM42-202ENST00000477126 RPL13AP40429 203 aaKnown RBP16.34■□□□□ 0.21
TMEM42-202ENST00000477126 NSUN5P1Q3KNT7 163 aa16.34■□□□□ 0.21
TMEM42-202ENST00000477126 PRR30Q53SZ7 412 aaPredicted RBP16.34■□□□□ 0.21
TMEM42-202ENST00000477126 C9orf47Q6ZRZ4 202 aa16.34■□□□□ 0.21
TMEM42-202ENST00000477126 VCYO14598 125 aa16.33■□□□□ 0.21
TMEM42-202ENST00000477126 TMEM101Q96IK0 257 aa16.33■□□□□ 0.21
TMEM42-202ENST00000477126 IGHV4-4A0A075B6R2 117 aa16.33■□□□□ 0.2
TMEM42-202ENST00000477126 I3L3M4 83 aa16.33■□□□□ 0.2
TMEM42-202ENST00000477126 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.32■□□□□ 0.2
TMEM42-202ENST00000477126 KLRB1Q12918 225 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 P0DMU3 169 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 FAM231AP0DMU4 169 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 FAM231CP0DMU5 169 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 IGHV3-30-3P0DP02 117 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 Q6Q795 121 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 RNF5Q99942 180 aa16.32■□□□□ 0.2
TMEM42-202ENST00000477126 A0A0B4J2C4 111 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 TMEM223A0PJW6 202 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 NPFFO15130 113 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 ZNF883P0CG24 379 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 LEPROTO15243 131 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 DEFB124Q8NES8 71 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 NPBQ8NG41 125 aa16.31■□□□□ 0.2
TMEM42-202ENST00000477126 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.3■□□□□ 0.2
TMEM42-202ENST00000477126 SMCR5Q8TEV8 140 aa16.3■□□□□ 0.2
TMEM42-202ENST00000477126 TIMM21Q9BVV7 248 aa16.3■□□□□ 0.2
TMEM42-202ENST00000477126 EDN2P20800 178 aa16.3■□□□□ 0.2
TMEM42-202ENST00000477126 KLK9Q9UKQ9 250 aa16.29■□□□□ 0.2
TMEM42-202ENST00000477126 FAM19A5Q7Z5A7 132 aaPredicted RBP16.28■□□□□ 0.2
TMEM42-202ENST00000477126 NDUFA12Q9UI09 145 aa16.28■□□□□ 0.2
TMEM42-202ENST00000477126 GRNP28799 593 aaKnown RBP16.28■□□□□ 0.2
TMEM42-202ENST00000477126 POLR2KP53803 58 aaKnown RBP16.28■□□□□ 0.2
TMEM42-202ENST00000477126 RHOHQ15669 191 aa16.28■□□□□ 0.2
TMEM42-202ENST00000477126 TRAV13-1A0A0B4J241 112 aa16.27■□□□□ 0.2
TMEM42-202ENST00000477126 hADV29S1A0JD25 119 aa16.27■□□□□ 0.19
TMEM42-202ENST00000477126 NXPH4O95158 308 aa16.27■□□□□ 0.19
TMEM42-202ENST00000477126 CD28P10747 220 aa16.27■□□□□ 0.19
TMEM42-202ENST00000477126 NDUFA7O95182 113 aa16.26■□□□□ 0.19
TMEM42-202ENST00000477126 LINC00315P59091 139 aa16.26■□□□□ 0.19
TMEM42-202ENST00000477126 Q8N9W7 124 aa16.26■□□□□ 0.19
TMEM42-202ENST00000477126 TMEM141Q96I45 108 aa16.26■□□□□ 0.19
TMEM42-202ENST00000477126 TRBV30A0A0K0K1B3 111 aa16.26■□□□□ 0.19
TMEM42-202ENST00000477126 HOXD3P31249 432 aaPredicted RBP16.26■□□□□ 0.19
TMEM42-202ENST00000477126 CSMD2Q7Z408 3487 aa16.26■□□□□ 0.19
TMEM42-202ENST00000477126 OTOGLQ3ZCN5 2332 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 KNCNA6PVL3 124 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 TMEM190Q8WZ59 177 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 TMEM126AQ9H061 195 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 CRYBG3Q68DQ2 2970 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 HRNRQ86YZ3 2850 aaPredicted RBP16.25■□□□□ 0.19
TMEM42-202ENST00000477126 M0R1W7 72 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 PRM2P04554 102 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 GAGE2AQ6NT46 116 aa16.25■□□□□ 0.19
TMEM42-202ENST00000477126 IGHV1-69DA0A0B4J2H0 117 aa16.23■□□□□ 0.19
TMEM42-202ENST00000477126 PROK1P58294 105 aa16.23■□□□□ 0.19
TMEM42-202ENST00000477126 TIMM17AQ99595 171 aa16.23■□□□□ 0.19
TMEM42-202ENST00000477126 CYSTM1Q9H1C7 97 aa16.23■□□□□ 0.19
TMEM42-202ENST00000477126 DEFB123Q8N688 67 aa16.22■□□□□ 0.19
TMEM42-202ENST00000477126 KIR2DL5BQ8NHK3 375 aa16.22■□□□□ 0.19
TMEM42-202ENST00000477126 Q9UF83 564 aa16.22■□□□□ 0.19
TMEM42-202ENST00000477126 IGFL2Q6UWQ7 119 aa16.22■□□□□ 0.19
TMEM42-202ENST00000477126 C3orf22Q8N5N4 141 aa16.22■□□□□ 0.19
TMEM42-202ENST00000477126 NRGNQ92686 78 aa16.22■□□□□ 0.19
TMEM42-202ENST00000477126 Q9HAA7 133 aa16.21■□□□□ 0.19
TMEM42-202ENST00000477126 KIF25-AS1Q9Y6Z4 181 aa16.21■□□□□ 0.19
TMEM42-202ENST00000477126 IGHV3-38A0A0C4DH36 116 aa16.2■□□□□ 0.18
TMEM42-202ENST00000477126 IGKV3D-7A0A0C4DH55 119 aa16.2■□□□□ 0.18
TMEM42-202ENST00000477126 IGLV4-3A0A075B6K6 122 aa16.2■□□□□ 0.18
TMEM42-202ENST00000477126 PPP1R17O96001 155 aa16.2■□□□□ 0.18
TMEM42-202ENST00000477126 SDIM1Q6ZPB5 146 aa16.2■□□□□ 0.18
TMEM42-202ENST00000477126 POM121L12Q8N7R1 296 aa16.19■□□□□ 0.18
TMEM42-202ENST00000477126 SMIM9A6NGZ8 99 aa16.19■□□□□ 0.18
TMEM42-202ENST00000477126 LST1O00453 97 aa16.19■□□□□ 0.18
TMEM42-202ENST00000477126 C9orf139Q6ZV77 190 aa16.19■□□□□ 0.18
TMEM42-202ENST00000477126 FAM110DQ8TAY7 271 aaPredicted RBP16.19■□□□□ 0.18
TMEM42-202ENST00000477126 H3BT86 120 aa16.18■□□□□ 0.18
TMEM42-202ENST00000477126 EBI3Q14213 229 aa16.17■□□□□ 0.18
TMEM42-202ENST00000477126 DNAJC30Q96LL9 226 aa16.17■□□□□ 0.18
TMEM42-202ENST00000477126 DAZ2Q13117 558 aaKnown RBP16.17■□□□□ 0.18
TMEM42-202ENST00000477126 DAZ4Q86SG3 579 aaKnown RBP16.17■□□□□ 0.18
TMEM42-202ENST00000477126 LITAFQ99732 161 aa16.17■□□□□ 0.18
TMEM42-202ENST00000477126 DAZ1Q9NQZ3 744 aaKnown RBP16.17■□□□□ 0.18
TMEM42-202ENST00000477126 DAZ3Q9NR90 486 aaKnown RBP16.17■□□□□ 0.18
TMEM42-202ENST00000477126 BSNQ9UPA5 3926 aa16.17■□□□□ 0.18
TMEM42-202ENST00000477126 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.17■□□□□ 0.18
TMEM42-202ENST00000477126 IGKV2-29A2NJV5 120 aaPredicted RBP16.17■□□□□ 0.18
TMEM42-202ENST00000477126 B9A039 149 aa16.17■□□□□ 0.18
TMEM42-202ENST00000477126 DSCR8Q96T75 97 aa16.17■□□□□ 0.18
TMEM42-202ENST00000477126 ZFP36P26651 326 aaKnown RBP16.16■□□□□ 0.18
TMEM42-202ENST00000477126 Q8N2B8 174 aa16.15■□□□□ 0.18
TMEM42-202ENST00000477126 ITLN2Q8WWU7 325 aaPredicted RBP16.15■□□□□ 0.18
TMEM42-202ENST00000477126 A0A087WVE0 104 aa16.15■□□□□ 0.18
TMEM42-202ENST00000477126 C20orf203Q8NBC4 194 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms