RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
CD55-208ENST00000476590 SNURFQ9Y675 71 aa3.04□□□□□ -1.92
CD55-208ENST00000476590 NACAE9PAV3 2078 aa3.04□□□□□ -1.92
CD55-208ENST00000476590 MED12Q93074 2177 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 IGHV5-51A0A0C4DH38 117 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 NTN3O00634 580 aaPredicted RBP3.03□□□□□ -1.92
CD55-208ENST00000476590 IGKV3-11P04433 115 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 EGR2P11161 476 aaPredicted RBP3.03□□□□□ -1.92
CD55-208ENST00000476590 RNASE4P34096 147 aaKnown RBP3.03□□□□□ -1.92
CD55-208ENST00000476590 ERHP84090 104 aaKnown RBP3.03□□□□□ -1.92
CD55-208ENST00000476590 MIAQ16674 131 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 ZNF876PQ49A33 203 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 Q6ZS52 159 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 PHF5AQ7RTV0 110 aaKnown RBP3.03□□□□□ -1.92
CD55-208ENST00000476590 TMEM141Q96I45 108 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 DSCAMO60469 2012 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 ZNF462Q96JM2 2506 aa3.03□□□□□ -1.92
CD55-208ENST00000476590 PROP1O75360 226 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 ZNF80P51504 273 aaPredicted RBP3.02□□□□□ -1.93
CD55-208ENST00000476590 CACNA1IQ9P0X4 2223 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 A0A087WZ39 114 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 IGHV3-43A0A0B4J1X8 118 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 LHBP01229 141 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 IGLV3-19P01714 112 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 IGHV3-43DP0DP04 118 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 CD52P31358 61 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 Q0VFX4 171 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 LCA10Q71F78 164 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 OBSCN-AS1Q96MR7 158 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 LITAFQ99732 161 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 PHLDA3Q9Y5J5 127 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 BAHCC1Q9P281 2608 aa3.02□□□□□ -1.93
CD55-208ENST00000476590 DSCAML1Q8TD84 2053 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 IGHV5-10-1A0A0J9YXX1 117 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 SOCS3O14543 225 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 FUSP35637 526 aaKnown RBP eCLIP3.01□□□□□ -1.93
CD55-208ENST00000476590 IGFL3Q6UXB1 125 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 C14orf132Q9NPU4 83 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 ZNF407Q9C0G0 2248 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 DEFB108AA8MXU0 73 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 CD28P10747 220 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 RPL39P5Q59GN2 51 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 ENHOQ6UWT2 76 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 Q6ZSV7 163 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 OPRPNQ99935 248 aaPredicted RBP3.01□□□□□ -1.93
CD55-208ENST00000476590 PRRC2AP48634 2157 aaKnown RBP3.01□□□□□ -1.93
CD55-208ENST00000476590 A0A0C4DFX4 3053 aa3.01□□□□□ -1.93
CD55-208ENST00000476590 EPOPA6NHQ4 379 aa3□□□□□ -1.93
CD55-208ENST00000476590 A8MUN3 132 aa3□□□□□ -1.93
CD55-208ENST00000476590 F6UB75 175 aa3□□□□□ -1.93
CD55-208ENST00000476590 M0R381 172 aa3□□□□□ -1.93
CD55-208ENST00000476590 ERC2-IT1O76042 136 aa3□□□□□ -1.93
CD55-208ENST00000476590 PPP1R17O96001 155 aa3□□□□□ -1.93
CD55-208ENST00000476590 TSHBP01222 138 aa3□□□□□ -1.93
CD55-208ENST00000476590 TRGV3P03979 118 aa3□□□□□ -1.93
CD55-208ENST00000476590 PATE4P0C8F1 98 aa3□□□□□ -1.93
CD55-208ENST00000476590 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
CD55-208ENST00000476590 NDUFA4L2Q9NRX3 87 aa3□□□□□ -1.93
CD55-208ENST00000476590 NOTCH4Q99466 2003 aa3□□□□□ -1.93
CD55-208ENST00000476590 IGHV4-4A0A075B6R2 117 aa3□□□□□ -1.93
CD55-208ENST00000476590 TRBV7-4A0A0J9YYF1 115 aa3□□□□□ -1.93
CD55-208ENST00000476590 FOLR3P41439 243 aa3□□□□□ -1.93
CD55-208ENST00000476590 PDE6HQ13956 83 aa3□□□□□ -1.93
CD55-208ENST00000476590 DEFB110Q30KQ9 67 aa3□□□□□ -1.93
CD55-208ENST00000476590 Q6ZRP5 223 aa3□□□□□ -1.93
CD55-208ENST00000476590 IGKV3D-11A0A0A0MRZ8 115 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 hDV103S1A0JD37 113 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 ZNF503-AS2A6NEH8 195 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 UBE2AP49459 152 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 ATP11AUNQ6ZP68 121 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 Q8N6K4 173 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 WFDC9Q8NEX5 89 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 DIRC1Q969H9 104 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 ESM1Q9NQ30 184 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 MRPL36Q9P0J6 103 aaKnown RBP2.99□□□□□ -1.93
CD55-208ENST00000476590 RTTNQ86VV8 2226 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 FREM1Q5H8C1 2179 aa2.99□□□□□ -1.93
CD55-208ENST00000476590 IGHV1-69P01742 117 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 LYZP61626 148 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 C15orf32Q32M92 178 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 PIK3CD-AS1Q5SR53 167 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 Q6ZTC4 211 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 UBL5Q9BZL1 73 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 TRAV22A0A0B4J277 110 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 A6NN06 94 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 H3BRN7 92 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 IGHV3-48P01763 117 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 IGHV3-30-3P0DP02 117 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 NDPQ00604 133 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 LY6G5CQ5SRR4 150 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 SPANXN1Q5VSR9 72 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 ZNF833PQ6ZTB9 187 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 LINC00269Q8N2A0 174 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 TMEM254Q8TBM7 123 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 CCL17Q92583 94 aa2.98□□□□□ -1.93
CD55-208ENST00000476590 IGHV3-64A0A075B6Q5 118 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms