RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TOMM20LQ6UXN7 152 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 LYG2Q86SG7 212 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 SNX29P2Q8IUI4 249 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 TMEM229BQ8NBD8 167 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 OR11H2Q8NH07 326 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 C6orf62Q9GZU0 229 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-211ENST00000476215 FXYD6Q9H0Q3 95 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 MS4A6AQ9H2W1 248 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 KLK5Q9Y337 293 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-211ENST00000476215 KIAA1109Q2LD37 5005 aa1.75□□□□□ -2.13
PTCD3-211ENST00000476215 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 IGKV3-7A0A075B6H7 116 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 TRAV2A0A0B4J234 112 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 C3orf85A0A1B0GTC6 90 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 NUPR2A6NF83 97 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 FAM25AB3EWG3 89 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 FAM25CB3EWG5 89 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 FAM25GB3EWG6 89 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 GNG7O60262 68 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 ATG12O94817 140 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 IFNA17P01571 189 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 IFNA4P05014 189 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 GZMBP10144 247 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 NPPCP23582 126 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 CRYBB3P26998 211 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 PIGPP57054 158 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 TSPEAR-AS2P59090 65 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 SPCS3P61009 180 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 SPINK9Q5DT21 86 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 RNASE10Q5GAN6 216 aaKnown RBP1.74□□□□□ -2.13
PTCD3-211ENST00000476215 LGALS9CQ6DKI2 356 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 LHFPL1Q86WI0 220 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 SELENOHQ8IZQ5 122 aaKnown RBP1.74□□□□□ -2.13
PTCD3-211ENST00000476215 FAM24BQ8N5W8 94 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 OR4X1Q8NH49 305 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 GPR146Q96CH1 333 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 TP53RKQ96S44 253 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 GINS3Q9BRX5 216 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 TMEM222Q9H0R3 208 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 MED28Q9H204 178 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 MIXL1Q9H2W2 232 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 C11orf1Q9H5F2 150 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.74□□□□□ -2.13
PTCD3-211ENST00000476215 MRPL36Q9P0J6 103 aaKnown RBP1.74□□□□□ -2.13
PTCD3-211ENST00000476215 COPZ2Q9P299 210 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 PUS1Q9Y606 427 aaKnown RBP eCLIP1.74□□□□□ -2.13
PTCD3-211ENST00000476215 TMEM56-RWDD3S4R434 201 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 APOBP04114 4563 aaKnown RBP1.74□□□□□ -2.13
PTCD3-211ENST00000476215 LRP1BQ9NZR2 4599 aa1.74□□□□□ -2.13
PTCD3-211ENST00000476215 SRRM2Q9UQ35 2752 aaKnown RBP1.73□□□□□ -2.13
PTCD3-211ENST00000476215 TRAV30A0A087WSZ9 112 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 CRYM-AS1A6NIL9 109 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 DISC1C4P0D8 188 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 GABARAPH6UMI1 98 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 DEFB4AO15263 64 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 RD3LP0DJH9 198 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 ATP6V0CP27449 155 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 OR10J1P30954 320 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 AP2S1P53680 142 aaPredicted RBP1.73□□□□□ -2.13
PTCD3-211ENST00000476215 TCTAP57738 103 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 DEFB131AP59861 70 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 YPEL3P61236 119 aaPredicted RBP1.73□□□□□ -2.13
PTCD3-211ENST00000476215 SSBP1Q04837 148 aaKnown RBP1.73□□□□□ -2.13
PTCD3-211ENST00000476215 SCGB2B2Q4G0G5 96 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 NMSQ5H8A3 153 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 RPP25LQ8N5L8 163 aaKnown RBP1.73□□□□□ -2.13
PTCD3-211ENST00000476215 OR13C8Q8NGS7 320 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 LHFPL5Q8TAF8 219 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 Q8WTZ3 238 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 AP3S1Q92572 193 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 SMIM12Q96EX1 92 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 DIRAS2Q96HU8 199 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 KRTAP4-1Q9BYQ7 146 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 C11orf68Q9H3H3 251 aaKnown RBP1.73□□□□□ -2.13
PTCD3-211ENST00000476215 NAA60Q9H7X0 242 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 ENY2Q9NPA8 101 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 CACFD1Q9UGQ2 172 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 RABAC1Q9UI14 185 aa1.73□□□□□ -2.13
PTCD3-211ENST00000476215 CEBPZOSA8MTT3 80 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 CORTO00230 105 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 GSTZ1O43708 216 aaPredicted RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 IFNA10P01566 189 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 IGLC1P0CG04 106 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 AKAIN1P0CW23 69 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SULT1A3P0DMM9 295 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SULT1A4P0DMN0 295 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SLC25A4P12235 298 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 MIFP14174 115 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 HLA-DMBP28068 263 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 EIF2B2P49770 351 aaKnown RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 TMBIM6P55061 237 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SNRPD3P62318 126 aaKnown RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SUPT4H1P63272 117 aaKnown RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 MRPS10P82664 201 aaKnown RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SPCS2Q15005 226 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SURF2Q15527 256 aaPredicted RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 C12orf74Q32Q52 190 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 CLVS1Q8IUQ0 354 aaPredicted RBP1.72□□□□□ -2.13
PTCD3-211ENST00000476215 DCANP1Q8TF63 244 aa1.72□□□□□ -2.13
PTCD3-211ENST00000476215 SMIM4Q8WVI0 70 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms