RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 IGHV3-74A0A0B4J1X5 117 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 TRAV2A0A0B4J234 112 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 A0A1B0GW15 77 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 RBMY1BA6NDE4 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 RBMY1EA6NEQ0 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 PRAC2D3DTV9 90 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 D6R8Y8 96 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 K7EMT4 169 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 SNAI2O43623 268 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 CD7P09564 240 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 RBMY1DP0C7P1 496 aaKnown RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 IFI27P40305 119 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 ZNF80P51504 273 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 PSG9Q00887 426 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 VAMP3Q15836 100 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 ZFAND6Q6FIF0 208 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 SLC25A34Q6PIV7 304 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 ADAMTSL5Q6ZMM2 481 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 S100A7AQ86SG5 101 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 AMN1Q8IY45 258 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 LYPD1Q8N2G4 141 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 DEFB125Q8N687 156 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 GATD1Q8NB37 220 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 ORAOV1Q8WV07 137 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 PRELID3AQ96N28 172 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 C11orf68Q9H3H3 251 aaKnown RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 SCRT2Q9NQ03 307 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 RABAC1Q9UI14 185 aa3.1□□□□□ -1.91
VPS13D-206ENST00000476045 KLK5Q9Y337 293 aaPredicted RBP3.1□□□□□ -1.91
VPS13D-206ENST00000476045 A0A087X0K7 114 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 CCL25O15444 150 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 NPYP01303 97 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 ORM1P02763 201 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 RPL7P18124 248 aaKnown RBP3.09□□□□□ -1.91
VPS13D-206ENST00000476045 EVI2AP22794 236 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 NANOS2P60321 138 aaKnown RBP3.09□□□□□ -1.91
VPS13D-206ENST00000476045 RPS20P60866 119 aaKnown RBP3.09□□□□□ -1.91
VPS13D-206ENST00000476045 CACNG7P62955 275 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 UBE2V1Q13404 147 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 MRPL51Q4U2R6 128 aaKnown RBP3.09□□□□□ -1.91
VPS13D-206ENST00000476045 MPV17L2Q567V2 206 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 SAPCD1Q5SSQ6 148 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 BVES-AS1Q5T3Y7 98 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 LINC01545Q5VT33 79 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 RNF182Q8N6D2 247 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 FER1L6-AS1Q8NA97 138 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 ZNF738Q8NE65 137 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 OR10AG1Q8NH19 301 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 WFDC10AQ9H1F0 79 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 MS4A6AQ9H2W1 248 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 RETNQ9HD89 108 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 KMT2AQ03164 3969 aa3.09□□□□□ -1.91
VPS13D-206ENST00000476045 HYDINQ4G0P3 5121 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 A0A096LNJ9 63 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 IGHV7-4-1A0A0J9YVY3 117 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 A4D1N5 150 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 RHODO00212 210 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 TAX1BP3O14907 124 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 GAS8-AS1O95177 125 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 CTSGP08311 255 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 GATA1P15976 413 aaPredicted RBP3.08□□□□□ -1.92
VPS13D-206ENST00000476045 CKS2P33552 79 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 PDE6HQ13956 83 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 DEFB135Q30KP9 77 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 ODF3L2Q3SX64 289 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 Q6AWC8 147 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 UNQ9165/PRO28630Q6UXU0 137 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 ORMDL3Q8N138 153 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 OVOL2Q9BRP0 275 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 MSRB1Q9NZV6 116 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 AGRNO00468 2067 aa3.08□□□□□ -1.92
VPS13D-206ENST00000476045 VPS13DQ5THJ4 4388 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 FABP5P3A8MUU1 101 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 VCYO14598 125 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 CRXO43186 299 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-206ENST00000476045 HBDP02042 147 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 IGLC6P0CF74 106 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 COX8AP10176 69 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 HIST1H1AQ02539 215 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-206ENST00000476045 TMEM97Q5BJF2 176 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 SAMD13Q5VXD3 122 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 AMMECR1LQ6DCA0 310 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 MORN3Q6PF18 240 aaPredicted RBP3.07□□□□□ -1.92
VPS13D-206ENST00000476045 ZNF493Q6ZR52 646 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 C2orf91Q6ZV80 131 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 OR4C5Q8NGB2 326 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 RNASE8Q8TDE3 154 aaKnown RBP3.07□□□□□ -1.92
VPS13D-206ENST00000476045 IFI27L1Q96BM0 104 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 RNF185Q96GF1 192 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 C18orf15Q96N68 181 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 METTL26Q96S19 204 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 NAA38Q9BRA0 125 aaKnown RBP3.07□□□□□ -1.92
VPS13D-206ENST00000476045 MAP1LC3AQ9H492 121 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 SMPXQ9UHP9 88 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 SELENOKQ9Y6D0 94 aa3.07□□□□□ -1.92
VPS13D-206ENST00000476045 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms