RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 PLAC8L1A1L4L8 177 aa11.01□□□□□ -0.65
CPSF3-203ENST00000475482 C5orf52A6NGY3 159 aa11.01□□□□□ -0.65
CPSF3-203ENST00000475482 SNRPEP62304 92 aaKnown RBP11.01□□□□□ -0.65
CPSF3-203ENST00000475482 ZNF56Q15929 161 aa11.01□□□□□ -0.65
CPSF3-203ENST00000475482 FAM74A4Q5TZK3 123 aa11.01□□□□□ -0.65
CPSF3-203ENST00000475482 MAP1LC3AQ9H492 121 aa11.01□□□□□ -0.65
CPSF3-203ENST00000475482 NOP10Q9NPE3 64 aaKnown RBP11.01□□□□□ -0.65
CPSF3-203ENST00000475482 RS1O15537 224 aa11□□□□□ -0.65
CPSF3-203ENST00000475482 CRYGDP07320 174 aa11□□□□□ -0.65
CPSF3-203ENST00000475482 ZFP2Q6ZN57 461 aa11□□□□□ -0.65
CPSF3-203ENST00000475482 LYRM9A8MSI8 78 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 HOXA5P20719 270 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 S100A2P29034 98 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 PRSS3P2Q8NHM4 247 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 JPT2Q9H910 190 aa10.99□□□□□ -0.65
CPSF3-203ENST00000475482 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 TRAV4A0A0B4J268 109 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 TNFRSF6BO95407 300 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 NCR2O95944 276 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 P0DMU3 169 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 FAM231AP0DMU4 169 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 FAM231CP0DMU5 169 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 LINC00315P59091 139 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 CHCHD1Q96BP2 118 aaKnown RBP10.98□□□□□ -0.65
CPSF3-203ENST00000475482 C20orf78Q9BR46 151 aa10.98□□□□□ -0.65
CPSF3-203ENST00000475482 DNAH2Q9P225 4427 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 SMKR1H3BMG3 65 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 SERF1AO75920 110 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 NPYP01303 97 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 ESDP10768 282 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 PMCHP20382 165 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 Q6ZTI0 123 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 FA2HQ7L5A8 372 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 SAMD10Q9BYL1 202 aa10.97□□□□□ -0.65
CPSF3-203ENST00000475482 NXT2Q9NPJ8 142 aaKnown RBP10.97□□□□□ -0.65
CPSF3-203ENST00000475482 NACAE9PAV3 2078 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 TRAV26-2A0A0B4J265 109 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 PRSS47A8MTI9 375 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 LINC00614P0C842 121 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 DAD1P61803 113 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 IQCJQ1A5X6 159 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 SUMO4Q6EEV6 95 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 NIT1Q86X76 327 aa10.96□□□□□ -0.65
CPSF3-203ENST00000475482 GAGE12BA1L429 117 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 HSBP1O75506 76 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 GAGE7O76087 117 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 GAGE12FP0CL80 117 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 GAGE12GP0CL81 117 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 GAGE12IP0CL82 117 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 UFSP1Q6NVU6 142 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 RNASEKQ6P5S7 137 aaKnown RBP10.95□□□□□ -0.66
CPSF3-203ENST00000475482 NRACQ8N912 160 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 TMEM18Q96B42 140 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 C18orf15Q96N68 181 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 ST20Q9HBF5 79 aa10.95□□□□□ -0.66
CPSF3-203ENST00000475482 FAT2Q9NYQ8 4349 aa10.94□□□□□ -0.66
CPSF3-203ENST00000475482 K7EMI3 77 aa10.94□□□□□ -0.66
CPSF3-203ENST00000475482 IGHV3-53P01767 116 aa10.94□□□□□ -0.66
CPSF3-203ENST00000475482 SUMO2P61956 95 aaKnown RBP10.94□□□□□ -0.66
CPSF3-203ENST00000475482 HIST3H2BBQ8N257 126 aa10.94□□□□□ -0.66
CPSF3-203ENST00000475482 NIT2Q9NQR4 276 aa10.94□□□□□ -0.66
CPSF3-203ENST00000475482 AP5S1Q9NUS5 200 aa10.94□□□□□ -0.66
CPSF3-203ENST00000475482 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
CPSF3-203ENST00000475482 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
CPSF3-203ENST00000475482 M0QY20 66 aa10.93□□□□□ -0.66
CPSF3-203ENST00000475482 GATA1P15976 413 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-203ENST00000475482 RPL32P62910 135 aaKnown RBP10.93□□□□□ -0.66
CPSF3-203ENST00000475482 LINC00612Q8N6U2 182 aa10.93□□□□□ -0.66
CPSF3-203ENST00000475482 DNAJC30Q96LL9 226 aa10.93□□□□□ -0.66
CPSF3-203ENST00000475482 PACRGQ96M98 296 aaPredicted RBP10.93□□□□□ -0.66
CPSF3-203ENST00000475482 HECTD4Q9Y4D8 3996 aa10.93□□□□□ -0.66
CPSF3-203ENST00000475482 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
CPSF3-203ENST00000475482 HTN3P15516 51 aa10.92□□□□□ -0.66
CPSF3-203ENST00000475482 IFI27P40305 119 aaPredicted RBP10.92□□□□□ -0.66
CPSF3-203ENST00000475482 Q8N8P6 123 aa10.92□□□□□ -0.66
CPSF3-203ENST00000475482 SMIM2Q9BVW6 85 aa10.92□□□□□ -0.66
CPSF3-203ENST00000475482 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 TCAPO15273 167 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 DEFB130BP0DP73 79 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 DEFB130AP0DP74 79 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 AMTP48728 403 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 PDZD11Q5EBL8 140 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 C15orf53Q8NAA6 179 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 RPL39LQ96EH5 51 aaKnown RBP10.91□□□□□ -0.66
CPSF3-203ENST00000475482 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
CPSF3-203ENST00000475482 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 LOC105371267A0A1B0GV96 52 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 VCYO14598 125 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 GAS8-AS1O95177 125 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 G0S2P27469 103 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 KIR2DL4Q99706 377 aa10.9□□□□□ -0.66
CPSF3-203ENST00000475482 TRBV6-4A0A1B0GX49 114 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 ATP5G1P05496 136 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 FABP4P15090 132 aa10.89□□□□□ -0.67
CPSF3-203ENST00000475482 LINC00310P59036 64 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms