RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 TEX49A0A1B0GTD5 131 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 A8MZ25 164 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 PRM2P04554 102 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 ZNF876PQ49A33 203 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 C3orf56Q8N813 242 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 MOB4Q9Y3A3 225 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 CENPEQ02224 2701 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 ZANQ9Y493 2812 aa10.21□□□□□ -0.77
SEMA4D-217ENST00000475255 POLQO75417 2590 aa10.21□□□□□ -0.78
SEMA4D-217ENST00000475255 SNCGO76070 127 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 P0DMU3 169 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 FAM231AP0DMU4 169 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 FAM231CP0DMU5 169 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 NDUFA4O00483 81 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 GAGE2BQ13066 116 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 GAGE2EQ4V326 116 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 FAM19A4Q96LR4 140 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 GAGE2DQ9UEU5 116 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 TRAV8-3A0A0A6YYJ7 113 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 IGHV4-38-2P0DP08 117 aa10.2□□□□□ -0.78
SEMA4D-217ENST00000475255 C10orf99Q6UWK7 81 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 IGHV4OR15-8A0A075B7B6 117 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 A0A087WW49 117 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 IGHV1-69DA0A0B4J2H0 117 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 FAM223BA6NKX1 122 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 H3BUX3 64 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 SPINK13Q1W4C9 94 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 FAM223AQ8IWN6 122 aa10.19□□□□□ -0.78
SEMA4D-217ENST00000475255 PPP1R17O96001 155 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 PROK1P58294 105 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 TTC32Q5I0X7 151 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 Q9UF83 564 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 A0A0U1RRA0 63 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 ZNF22P17026 224 aaPredicted RBP10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 PAPPA-AS1Q5QFB9 102 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 Q8N1Y9 231 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 TMEM263Q8WUH6 116 aaKnown RBP10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
SEMA4D-217ENST00000475255 MYO9AB2RTY4 2548 aa10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 KLK9Q2XQG4 91 aa10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 C19orf54Q5BKX5 351 aa10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 TMEM141Q96I45 108 aa10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 DUX5Q96PT3 197 aa10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 KNCNA6PVL3 124 aa10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 UTP20O75691 2785 aaKnown RBP10.17□□□□□ -0.78
SEMA4D-217ENST00000475255 TMEM223A0PJW6 202 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 KLLNB2CW77 178 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 CCDC179H3BU77 68 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 M0QY20 66 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 SBSPONQ8IVN8 264 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 DAND5Q8N907 189 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 TRBV27A0A0K0K1C4 114 aa10.16□□□□□ -0.78
SEMA4D-217ENST00000475255 NXPH4O95158 308 aa10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 GAGE5Q13069 117 aa10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 GAGE6Q13070 117 aa10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 VCX2Q9H322 139 aa10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 DAZ1Q9NQZ3 744 aaKnown RBP10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 USP9XQ93008 2570 aaPredicted RBP10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 RHODO00212 210 aa10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 MED14OSP0DP75 135 aa10.15□□□□□ -0.78
SEMA4D-217ENST00000475255 TMEM262E9PQX1 116 aa10.15□□□□□ -0.79
SEMA4D-217ENST00000475255 CLEC2BQ92478 149 aa10.15□□□□□ -0.79
SEMA4D-217ENST00000475255 SETD2Q9BYW2 2564 aaPredicted RBP10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 IGHV3-16A0A0C4DH30 117 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 TRIAP1O43715 76 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 ADAMTSL4-AS1Q5T5F5 129 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 POM121L12Q8N7R1 296 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 C15orf53Q8NAA6 179 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 TRAV8-4A0A0B4J246 113 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 A0A0J9YXY3 114 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 LEPROTO15243 131 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 APRG1Q8IVJ8 170 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 DUX3Q96PT4 197 aa10.14□□□□□ -0.79
SEMA4D-217ENST00000475255 WNK1Q9H4A3 2382 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 NHLRC4P0CG21 123 aaPredicted RBP10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 DCANP1Q8TF63 244 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 IGLV4-3A0A075B6K6 122 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 IGHV4-61A0A0C4DH41 118 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 LGALS9O00182 355 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 C2orf82Q6UX34 121 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 TLN2Q9Y4G6 2542 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 C19orf84I3L1E1 186 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 IGHV3-30-3P0DP02 117 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 C20orf203Q8NBC4 194 aa10.13□□□□□ -0.79
SEMA4D-217ENST00000475255 FLNCQ14315 2725 aa10.12□□□□□ -0.79
SEMA4D-217ENST00000475255 CD28P10747 220 aa10.12□□□□□ -0.79
SEMA4D-217ENST00000475255 NDUFV3P56181 108 aaKnown RBP10.12□□□□□ -0.79
SEMA4D-217ENST00000475255 ATXN8Q156A1 80 aa10.12□□□□□ -0.79
SEMA4D-217ENST00000475255 ZNF625Q96I27 306 aaPredicted RBP10.12□□□□□ -0.79
SEMA4D-217ENST00000475255 SMIM20Q8N5G0 67 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 ITPR1Q14643 2758 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 IGHV3-38A0A0C4DH36 116 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 LY6DQ14210 128 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 IGHG2P01859 326 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 IFITM1P13164 125 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 ID1P41134 155 aa10.1□□□□□ -0.79
SEMA4D-217ENST00000475255 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms