RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 GAGE1Q13065 139 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 ZC2HC1BQ5TFG8 222 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 NEGR1Q7Z3B1 354 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 TMEM141Q96I45 108 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 HIGD1BQ9P298 99 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 TP53TG1Q9Y2A0 90 aa7.13□□□□□ -1.27
USP39-214ENST00000474572 CHTOPQ9Y3Y2 248 aaKnown RBP7.13□□□□□ -1.27
USP39-214ENST00000474572 RHODO00212 210 aa7.12□□□□□ -1.27
USP39-214ENST00000474572 PCP2Q8IVA1 136 aa7.12□□□□□ -1.27
USP39-214ENST00000474572 LINC01587Q99440 93 aa7.12□□□□□ -1.27
USP39-214ENST00000474572 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
USP39-214ENST00000474572 PRSS29PA6NIE9 313 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 I3L3M4 83 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 SAP30O75446 220 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 P0DMU3 169 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 FAM231AP0DMU4 169 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 FAM231CP0DMU5 169 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 NMUP48645 174 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 HSD52Q0P140 79 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 TMEM97Q5BJF2 176 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 CFAP126Q5VTH2 177 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 GTSCR1Q86UQ5 136 aa7.11□□□□□ -1.27
USP39-214ENST00000474572 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 IGHV3-53P01767 116 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 PRM2P04554 102 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
USP39-214ENST00000474572 FOSL1P15407 271 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 ZNF25P17030 456 aaPredicted RBP7.1□□□□□ -1.27
USP39-214ENST00000474572 SEC11AP67812 179 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 PMVKQ15126 192 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 PAPPA-AS1Q5QFB9 102 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 LINC00482Q8N8I6 264 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 C20orf203Q8NBC4 194 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 RNASE8Q8TDE3 154 aaKnown RBP7.1□□□□□ -1.27
USP39-214ENST00000474572 ORAOV1Q8WV07 137 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 DNAJC30Q96LL9 226 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 TMEM208Q9BTX3 173 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
USP39-214ENST00000474572 UNC79Q9P2D8 2635 aa7.09□□□□□ -1.27
USP39-214ENST00000474572 E9PLD3 99 aa7.09□□□□□ -1.27
USP39-214ENST00000474572 TAX1BP3O14907 124 aa7.09□□□□□ -1.27
USP39-214ENST00000474572 NPSP0C0P6 89 aa7.09□□□□□ -1.27
USP39-214ENST00000474572 AZU1P20160 251 aa7.09□□□□□ -1.27
USP39-214ENST00000474572 RPL39P62891 51 aaKnown RBP7.09□□□□□ -1.27
USP39-214ENST00000474572 TMEM263Q8WUH6 116 aaKnown RBP7.09□□□□□ -1.27
USP39-214ENST00000474572 XCL2Q9UBD3 114 aa7.09□□□□□ -1.27
USP39-214ENST00000474572 HTN1P15515 57 aa7.08□□□□□ -1.28
USP39-214ENST00000474572 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
USP39-214ENST00000474572 MRPL16Q9NX20 251 aaKnown RBP7.08□□□□□ -1.28
USP39-214ENST00000474572 PYGO1Q9Y3Y4 419 aa7.08□□□□□ -1.28
USP39-214ENST00000474572 SORL1Q92673 2214 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 TRBV25-1A0A075B6N4 114 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 PLAC8L1A1L4L8 177 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 INAFM1C9JVW0 142 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 CRYBA4P53673 196 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 TCTAP57738 103 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 DAZ2Q13117 558 aaKnown RBP7.07□□□□□ -1.28
USP39-214ENST00000474572 Q6ZSN1 163 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 NFE4Q86UQ8 179 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 CSNK1G2-AS1Q8NCQ2 148 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 C1QTNF4Q9BXJ3 329 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
USP39-214ENST00000474572 HELZ2Q9BYK8 2649 aaKnown RBP7.06□□□□□ -1.28
USP39-214ENST00000474572 SONP18583 2426 aaKnown RBP7.06□□□□□ -1.28
USP39-214ENST00000474572 IGLV4-3A0A075B6K6 122 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 C11orf86A6NJI1 115 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 TAL2Q16559 108 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 CHCHD7Q9BUK0 85 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 CHAC1Q9BUX1 264 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 WFDC10AQ9H1F0 79 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
USP39-214ENST00000474572 CCDC168Q8NDH2 2452 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 IGHV3-73A0A0B4J1V6 119 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 CRLF1O75462 422 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 INSL3P51460 131 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 FAM104AQ969W3 186 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 C16orf74Q96GX8 76 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 AMELXQ99217 191 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 OVOL2Q9BRP0 275 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 TLN2Q9Y4G6 2542 aa7.05□□□□□ -1.28
USP39-214ENST00000474572 ITPR2Q14571 2701 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 TRBV10-1A0A0K0K1A3 114 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 H3BRM9 83 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 CIDEAO60543 219 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 PF4P02776 101 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 Q6ZVH6 145 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 ZNRF2Q8NHG8 242 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 PRADC1Q9BSG0 188 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 Q9UF83 564 aa7.04□□□□□ -1.28
USP39-214ENST00000474572 CUBNO60494 3623 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 TRBV7-3A0A075B6L6 115 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 TRAV8-6A0A0B4J262 113 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 A6NDN8 102 aa7.03□□□□□ -1.28
USP39-214ENST00000474572 HERVK_113P61574 105 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms