RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 K7ERJ3 54 aa15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 SCGB1A1P11684 91 aa15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 DEFB1P60022 68 aa15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 C12orf74Q32Q52 190 aa15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 C16orf92Q96LL3 132 aa15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 RPL24P83731 157 aaKnown RBP15.4■□□□□ 0.06
SMIM11A-204ENST00000474455 A0A1B0GWB2 263 aa15.39■□□□□ 0.05
SMIM11A-204ENST00000474455 MED14OSP0DP75 135 aa15.39■□□□□ 0.05
SMIM11A-204ENST00000474455 TOMM6Q96B49 74 aa15.39■□□□□ 0.05
SMIM11A-204ENST00000474455 ZNF479Q96JC4 524 aa15.39■□□□□ 0.05
SMIM11A-204ENST00000474455 LINC00477Q96M19 166 aa15.39■□□□□ 0.05
SMIM11A-204ENST00000474455 M0R381 172 aa15.38■□□□□ 0.05
SMIM11A-204ENST00000474455 SHISA2Q6UWI4 295 aa15.38■□□□□ 0.05
SMIM11A-204ENST00000474455 TRBV7-3A0A075B6L6 115 aa15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 TEX48A0A1B0GUV7 120 aa15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 HIST1H4GQ99525 98 aa15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 CHTOPQ9Y3Y2 248 aaKnown RBP15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 OR11H12B2RN74 326 aa15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 PPP1R17O96001 155 aa15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 OR11H2Q8NH07 326 aa15.37■□□□□ 0.05
SMIM11A-204ENST00000474455 TRAV26-2A0A0B4J265 109 aa15.36■□□□□ 0.05
SMIM11A-204ENST00000474455 MYMXA0A1B0GTQ4 84 aa15.36■□□□□ 0.05
SMIM11A-204ENST00000474455 H3BVH4 76 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 K7EQG2 157 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 SUMO2P61956 95 aaKnown RBP15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 RRN3P1Q2M238 152 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 SCGB3A1Q96QR1 104 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 DPH3P1Q9H4G8 78 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 TRAV21A0A0B4J279 112 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 ZNF688P0C7X2 276 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 NEXN-AS1Q8NBZ9 246 aa15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 SPANXB1Q9NS25 103 aaPredicted RBP15.35■□□□□ 0.05
SMIM11A-204ENST00000474455 LINC01549A6NIU2 74 aa15.34■□□□□ 0.05
SMIM11A-204ENST00000474455 IGLV1-51P01701 117 aa15.34■□□□□ 0.05
SMIM11A-204ENST00000474455 SAMD13Q5VXD3 122 aa15.33■□□□□ 0.05
SMIM11A-204ENST00000474455 F6UB75 175 aa15.33■□□□□ 0.04
SMIM11A-204ENST00000474455 ZNF256Q9Y2P7 627 aaPredicted RBP15.33■□□□□ 0.04
SMIM11A-204ENST00000474455 TRBV7-9A0A0J9YWB2 115 aa15.32■□□□□ 0.04
SMIM11A-204ENST00000474455 ASIPP42127 132 aa15.32■□□□□ 0.04
SMIM11A-204ENST00000474455 OR10J6PQ8NGY7 276 aa15.32■□□□□ 0.04
SMIM11A-204ENST00000474455 SIGMAR1Q99720 223 aa15.32■□□□□ 0.04
SMIM11A-204ENST00000474455 WFDC9Q8NEX5 89 aa15.31■□□□□ 0.04
SMIM11A-204ENST00000474455 RASL10AQ92737 203 aa15.31■□□□□ 0.04
SMIM11A-204ENST00000474455 PRR9Q5T870 116 aa15.31■□□□□ 0.04
SMIM11A-204ENST00000474455 TMEM238LA0A1B0GVL6 79 aa15.3■□□□□ 0.04
SMIM11A-204ENST00000474455 A6NJY4 79 aa15.3■□□□□ 0.04
SMIM11A-204ENST00000474455 RPL32P62910 135 aaKnown RBP15.3■□□□□ 0.04
SMIM11A-204ENST00000474455 GAGE13Q4V321 117 aa15.3■□□□□ 0.04
SMIM11A-204ENST00000474455 ZFAND2AQ8N6M9 145 aa15.3■□□□□ 0.04
SMIM11A-204ENST00000474455 POM121L12Q8N7R1 296 aa15.3■□□□□ 0.04
SMIM11A-204ENST00000474455 APRG1Q8IVJ8 170 aa15.29■□□□□ 0.04
SMIM11A-204ENST00000474455 WFDC2Q14508 124 aa15.29■□□□□ 0.04
SMIM11A-204ENST00000474455 S100A4P26447 101 aaKnown RBP15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 ID1P41134 155 aa15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 PAPPA-AS1Q5QFB9 102 aa15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 BAALCQ8WXS3 180 aa15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 FAM19A4Q96LR4 140 aa15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 SPAG8Q99932 426 aaPredicted RBP15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 SPATA25Q9BR10 227 aa15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 PHLDA3Q9Y5J5 127 aa15.28■□□□□ 0.04
SMIM11A-204ENST00000474455 TRAV25A0A0B4J276 109 aa15.27■□□□□ 0.04
SMIM11A-204ENST00000474455 C2orf66Q6UXQ4 117 aa15.27■□□□□ 0.04
SMIM11A-204ENST00000474455 PRO0461Q9UI25 63 aa15.27■□□□□ 0.04
SMIM11A-204ENST00000474455 GAGE12HA6NDE8 117 aa15.27■□□□□ 0.03
SMIM11A-204ENST00000474455 DEFB131AP59861 70 aa15.27■□□□□ 0.03
SMIM11A-204ENST00000474455 SNRPD3P62318 126 aaKnown RBP15.27■□□□□ 0.03
SMIM11A-204ENST00000474455 C9orf66Q5T8R8 295 aa15.27■□□□□ 0.03
SMIM11A-204ENST00000474455 H3BMG7 143 aa15.26■□□□□ 0.03
SMIM11A-204ENST00000474455 NXPH4O95158 308 aa15.26■□□□□ 0.03
SMIM11A-204ENST00000474455 Q6ZQT7 251 aa15.26■□□□□ 0.03
SMIM11A-204ENST00000474455 DNHD1Q96M86 4753 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 CIDEAO60543 219 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 CD7P09564 240 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 PRADC1Q9BSG0 188 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 MAP6D1Q9H9H5 199 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 PRSS29PA6NIE9 313 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 AZU1P20160 251 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 ODF3L2Q3SX64 289 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 ATP6V0E2Q8NHE4 81 aa15.25■□□□□ 0.03
SMIM11A-204ENST00000474455 TRAV2A0A0B4J234 112 aa15.24■□□□□ 0.03
SMIM11A-204ENST00000474455 OXLD1Q5BKU9 147 aa15.24■□□□□ 0.03
SMIM11A-204ENST00000474455 C14orf178Q8N769 122 aaPredicted RBP15.24■□□□□ 0.03
SMIM11A-204ENST00000474455 KNCNA6PVL3 124 aa15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 ANXA2RQ3ZCQ2 193 aa15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 MORN3Q6PF18 240 aaPredicted RBP15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 RPL39LQ96EH5 51 aaKnown RBP15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 WFDC10AQ9H1F0 79 aa15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 INSL3P51460 131 aa15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 HERVK_113P61574 105 aa15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 CYSLTR1Q9Y271 337 aa15.23■□□□□ 0.03
SMIM11A-204ENST00000474455 DNAH3Q8TD57 4116 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 ZNF815PA8K554 130 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 IGKV3-20P01619 116 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 MGPP08493 103 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 UBE2D1P51668 147 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 BEAN1Q3B7T3 259 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 LYRM7Q5U5X0 104 aa15.22■□□□□ 0.03
SMIM11A-204ENST00000474455 TMEM141Q96I45 108 aa15.21■□□□□ 0.03
SMIM11A-204ENST00000474455 A0A0J9YX75 114 aa15.2■□□□□ 0.02
SMIM11A-204ENST00000474455 ETDBQ3ZM63 59 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms