RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TRBV6-5A0A0K0K1A5 114 aa13.86□□□□□ -0.19
ECHDC1-214ENST00000474289 H3BT86 120 aa13.86□□□□□ -0.19
ECHDC1-214ENST00000474289 FAM74A4Q5TZK3 123 aa13.86□□□□□ -0.19
ECHDC1-214ENST00000474289 DUX3Q96PT4 197 aa13.86□□□□□ -0.19
ECHDC1-214ENST00000474289 PRRC2AP48634 2157 aaKnown RBP13.86□□□□□ -0.19
ECHDC1-214ENST00000474289 FAM240AA0A1B0GVK7 77 aa13.85□□□□□ -0.19
ECHDC1-214ENST00000474289 NSUN5P1Q3KNT7 163 aa13.85□□□□□ -0.19
ECHDC1-214ENST00000474289 C3orf56Q8N813 242 aa13.85□□□□□ -0.19
ECHDC1-214ENST00000474289 TNFRSF18Q9Y5U5 241 aa13.85□□□□□ -0.19
ECHDC1-214ENST00000474289 ZFHX2Q9C0A1 2572 aaPredicted RBP13.84□□□□□ -0.19
ECHDC1-214ENST00000474289 SPTBN1Q01082 2364 aaKnown RBP13.84□□□□□ -0.19
ECHDC1-214ENST00000474289 IGKV3-7A0A075B6H7 116 aa13.84□□□□□ -0.19
ECHDC1-214ENST00000474289 PRSS2P07478 247 aa13.84□□□□□ -0.19
ECHDC1-214ENST00000474289 CLEC2BQ92478 149 aa13.84□□□□□ -0.19
ECHDC1-214ENST00000474289 TLN1Q9Y490 2541 aaKnown RBP13.84□□□□□ -0.19
ECHDC1-214ENST00000474289 IGHV3-30-3P0DP02 117 aa13.83□□□□□ -0.19
ECHDC1-214ENST00000474289 ZFP36P26651 326 aaKnown RBP13.83□□□□□ -0.19
ECHDC1-214ENST00000474289 RPL11P62913 178 aaKnown RBP13.83□□□□□ -0.19
ECHDC1-214ENST00000474289 Q6ZSV7 163 aa13.83□□□□□ -0.19
ECHDC1-214ENST00000474289 TRBV7-7A0A0K0K1E9 115 aa13.83□□□□□ -0.2
ECHDC1-214ENST00000474289 TRBV12-3P01733 135 aa13.83□□□□□ -0.2
ECHDC1-214ENST00000474289 RHOHQ15669 191 aa13.82□□□□□ -0.2
ECHDC1-214ENST00000474289 DEFB121Q5J5C9 76 aa13.82□□□□□ -0.2
ECHDC1-214ENST00000474289 ADAMTSL4-AS1Q5T5F5 129 aa13.82□□□□□ -0.2
ECHDC1-214ENST00000474289 LINC01587Q99440 93 aa13.82□□□□□ -0.2
ECHDC1-214ENST00000474289 SPXQ9BT56 116 aa13.82□□□□□ -0.2
ECHDC1-214ENST00000474289 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
ECHDC1-214ENST00000474289 IGLV4-3A0A075B6K6 122 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 KLLNB2CW77 178 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 M0QY20 66 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 COX6CP09669 75 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 CDSNQ15517 529 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 TMEM95Q3KNT9 176 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 C20orf203Q8NBC4 194 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 SIRPDQ9H106 197 aa13.81□□□□□ -0.2
ECHDC1-214ENST00000474289 LST1O00453 97 aa13.8□□□□□ -0.2
ECHDC1-214ENST00000474289 TRGV11A0A075B6L2 103 aa13.8□□□□□ -0.2
ECHDC1-214ENST00000474289 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
ECHDC1-214ENST00000474289 TRAV8-3A0A0A6YYJ7 113 aa13.79□□□□□ -0.2
ECHDC1-214ENST00000474289 TMEM126AQ9H061 195 aa13.79□□□□□ -0.2
ECHDC1-214ENST00000474289 SAA4P35542 130 aa13.79□□□□□ -0.2
ECHDC1-214ENST00000474289 NPC2P61916 151 aa13.79□□□□□ -0.2
ECHDC1-214ENST00000474289 VPREB3Q9UKI3 123 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 TRAV12-3A0A0B4J271 114 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 I3L3M4 83 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 NDUFA4O00483 81 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 C5orf56Q8N8D9 126 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 SPANXCQ9NY87 97 aa13.78□□□□□ -0.2
ECHDC1-214ENST00000474289 TMEM101Q96IK0 257 aa13.77□□□□□ -0.21
ECHDC1-214ENST00000474289 TRAV41A0A0B4J266 112 aa13.76□□□□□ -0.21
ECHDC1-214ENST00000474289 FAM236AA0A1B0GUQ0 79 aa13.76□□□□□ -0.21
ECHDC1-214ENST00000474289 FAM236BA0A1B0GV22 79 aa13.76□□□□□ -0.21
ECHDC1-214ENST00000474289 PPDPFQ9H3Y8 114 aa13.76□□□□□ -0.21
ECHDC1-214ENST00000474289 MIAQ16674 131 aa13.76□□□□□ -0.21
ECHDC1-214ENST00000474289 TMEM219Q86XT9 240 aa13.75□□□□□ -0.21
ECHDC1-214ENST00000474289 TMEM61Q8N0U2 210 aa13.75□□□□□ -0.21
ECHDC1-214ENST00000474289 NDUFA12Q9UI09 145 aa13.75□□□□□ -0.21
ECHDC1-214ENST00000474289 C19orf54Q5BKX5 351 aa13.74□□□□□ -0.21
ECHDC1-214ENST00000474289 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
ECHDC1-214ENST00000474289 CEP295Q9C0D2 2601 aa13.74□□□□□ -0.21
ECHDC1-214ENST00000474289 C11orf71Q6IPW1 123 aa13.74□□□□□ -0.21
ECHDC1-214ENST00000474289 FAM104AQ969W3 186 aa13.74□□□□□ -0.21
ECHDC1-214ENST00000474289 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 IGHV1-58A0A0C4DH39 117 aa13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 CCL21O00585 134 aa13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 MRPS36P82909 103 aaKnown RBP13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 NBASA2RRP1 2371 aa13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 A8MZ25 164 aa13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 CEMP1Q6PRD7 247 aaPredicted RBP13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 RHPN1-AS1Q9BWJ2 59 aa13.73□□□□□ -0.21
ECHDC1-214ENST00000474289 CD28P10747 220 aa13.72□□□□□ -0.21
ECHDC1-214ENST00000474289 CELSR1Q9NYQ6 3014 aa13.72□□□□□ -0.21
ECHDC1-214ENST00000474289 IGHV3-11P01762 117 aa13.71□□□□□ -0.21
ECHDC1-214ENST00000474289 FBXL19-AS1Q494R0 122 aa13.71□□□□□ -0.21
ECHDC1-214ENST00000474289 IMUPQ9GZP8 106 aa13.71□□□□□ -0.21
ECHDC1-214ENST00000474289 SPTA1P02549 2419 aa13.71□□□□□ -0.21
ECHDC1-214ENST00000474289 RNASE13Q5GAN3 156 aaKnown RBP13.71□□□□□ -0.22
ECHDC1-214ENST00000474289 VSIG2Q96IQ7 327 aa13.7□□□□□ -0.22
ECHDC1-214ENST00000474289 SMCR5Q8TEV8 140 aa13.7□□□□□ -0.22
ECHDC1-214ENST00000474289 DAND5Q8N907 189 aa13.69□□□□□ -0.22
ECHDC1-214ENST00000474289 YAE1D1Q9NRH1 226 aa13.69□□□□□ -0.22
ECHDC1-214ENST00000474289 PYGO1Q9Y3Y4 419 aa13.69□□□□□ -0.22
ECHDC1-214ENST00000474289 TRAV12-2A0A075B6T6 113 aa13.68□□□□□ -0.22
ECHDC1-214ENST00000474289 ACYP1P07311 99 aa13.68□□□□□ -0.22
ECHDC1-214ENST00000474289 LINC00694P0DN24 101 aa13.68□□□□□ -0.22
ECHDC1-214ENST00000474289 EDN2P20800 178 aa13.68□□□□□ -0.22
ECHDC1-214ENST00000474289 LY6DQ14210 128 aa13.68□□□□□ -0.22
ECHDC1-214ENST00000474289 C9orf153Q5TBE3 101 aa13.67□□□□□ -0.22
ECHDC1-214ENST00000474289 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
ECHDC1-214ENST00000474289 MOB4Q9Y3A3 225 aa13.67□□□□□ -0.22
ECHDC1-214ENST00000474289 PTPRZ1P23471 2315 aaPredicted RBP13.67□□□□□ -0.22
ECHDC1-214ENST00000474289 C3orf22Q8N5N4 141 aa13.66□□□□□ -0.22
ECHDC1-214ENST00000474289 DUX5Q96PT3 197 aa13.66□□□□□ -0.22
ECHDC1-214ENST00000474289 NPFFO15130 113 aa13.66□□□□□ -0.22
ECHDC1-214ENST00000474289 ADORA2A-AS1P86434 159 aa13.66□□□□□ -0.22
ECHDC1-214ENST00000474289 PTPRQQ9UMZ3 2332 aa13.66□□□□□ -0.22
ECHDC1-214ENST00000474289 A0A1W2PPR1 153 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms