RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 RAB4AP20338 218 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 RAB4BP61018 213 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 SUMO2P61956 95 aaKnown RBP5.33□□□□□ -1.56
CCDC93-207ENST00000474006 FAM104BQ5XKR9 115 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 AMN1Q8IY45 258 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 GATD1Q8NB37 220 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 RNF185Q96GF1 192 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 DPH3P1Q9H4G8 78 aa5.33□□□□□ -1.56
CCDC93-207ENST00000474006 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 RHODO00212 210 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 MGPP08493 103 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 GATA1P15976 413 aaPredicted RBP5.32□□□□□ -1.56
CCDC93-207ENST00000474006 SLAQ13239 276 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 MRPL51Q4U2R6 128 aaKnown RBP5.32□□□□□ -1.56
CCDC93-207ENST00000474006 TMEM136Q6ZRR5 245 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 SLC25A29Q8N8R3 303 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 PHLDA1Q8WV24 401 aaPredicted RBP5.32□□□□□ -1.56
CCDC93-207ENST00000474006 GNB1LQ9BYB4 327 aa5.32□□□□□ -1.56
CCDC93-207ENST00000474006 TRAV10A0A0B4J240 114 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 TRAV26-2A0A0B4J265 109 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 A0A0J9YY99 117 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 M0QY20 66 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 GAS8-AS1O95177 125 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 APCSP02743 223 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 CRYBA4P53673 196 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 ZNF56Q15929 161 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 COX19Q49B96 90 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 DGAT2L7PQ6IED9 249 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 Q9UF83 564 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 PRO0255Q9UI72 69 aa5.31□□□□□ -1.56
CCDC93-207ENST00000474006 DYNC2H1Q8NCM8 4307 aaKnown RBP5.3□□□□□ -1.56
CCDC93-207ENST00000474006 TRAV26-1A0A087WT03 109 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 SMKR1H3BMG3 65 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 P0DMU3 169 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 FAM231AP0DMU4 169 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 FAM231CP0DMU5 169 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 SUMO4Q6EEV6 95 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 LINC00476Q8WZB0 136 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 VSIG2Q96IQ7 327 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 TRAPPC1Q9Y5R8 145 aa5.3□□□□□ -1.56
CCDC93-207ENST00000474006 LOC100131303A0A0U1RQF7 123 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 IGLL5B9A064 214 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 H7C1H1 209 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 K7EQD1 137 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 HLA-DQA1P01909 254 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 RAB5AP20339 215 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 CKS2P33552 79 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 RPS10P46783 165 aaKnown RBP5.29□□□□□ -1.56
CCDC93-207ENST00000474006 KIAA1644Q3SXP7 199 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 CEMP1Q6PRD7 247 aaPredicted RBP5.29□□□□□ -1.56
CCDC93-207ENST00000474006 FRZBQ92765 325 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 PRADC1Q9BSG0 188 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 NIT2Q9NQR4 276 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 MUC4Q99102 2169 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 DNAH7Q8WXX0 4024 aa5.29□□□□□ -1.56
CCDC93-207ENST00000474006 STAB2Q8WWQ8 2551 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 TRBV10-1A0A0K0K1A3 114 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 GAGE12JA6NER3 117 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 D6R8Y8 96 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 H3BNG1 76 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 NCR2O95944 276 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 PPBPP02775 128 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 MT-ND6P03923 174 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 GAGE1Q13065 139 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 GAGE4Q13068 117 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 GAGE5Q13069 117 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 RHOHQ15669 191 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 ORMDL3Q8N138 153 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 NEXN-AS1Q8NBZ9 246 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 ZNRF2Q8NHG8 242 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 MUC7Q8TAX7 377 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 RPL39LQ96EH5 51 aaKnown RBP5.28□□□□□ -1.56
CCDC93-207ENST00000474006 TNFRSF18Q9Y5U5 241 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 TGP01266 2768 aa5.28□□□□□ -1.56
CCDC93-207ENST00000474006 TRBV7-3A0A075B6L6 115 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 NUDT3O95989 172 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 PPP1R17O96001 155 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 TRGC2P03986 189 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 NPSP0C0P6 89 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 RPL36AP83881 106 aaKnown RBP5.27□□□□□ -1.57
CCDC93-207ENST00000474006 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
CCDC93-207ENST00000474006 ZFAND6Q6FIF0 208 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 NRACQ8N912 160 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.27□□□□□ -1.57
CCDC93-207ENST00000474006 RPL36ALQ969Q0 106 aaKnown RBP5.27□□□□□ -1.57
CCDC93-207ENST00000474006 DNAJC30Q96LL9 226 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 PRELID3AQ96N28 172 aa5.27□□□□□ -1.57
CCDC93-207ENST00000474006 ALKBH7Q9BT30 221 aaPredicted RBP5.27□□□□□ -1.57
CCDC93-207ENST00000474006 A0A096LPF7 62 aa5.26□□□□□ -1.57
CCDC93-207ENST00000474006 TRBV6-5A0A0K0K1A5 114 aa5.26□□□□□ -1.57
CCDC93-207ENST00000474006 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
CCDC93-207ENST00000474006 NPYP01303 97 aa5.26□□□□□ -1.57
CCDC93-207ENST00000474006 OR10J3Q5JRS4 329 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms