RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.39□□□□□ -0.91
BRAT1-205ENST00000473879 SUMO4Q6EEV6 95 aa9.39□□□□□ -0.91
BRAT1-205ENST00000473879 HIST1H2BHQ93079 126 aa9.39□□□□□ -0.91
BRAT1-205ENST00000473879 HIST1H2BNQ99877 126 aa9.39□□□□□ -0.91
BRAT1-205ENST00000473879 HIST1H2BMQ99879 126 aa9.39□□□□□ -0.91
BRAT1-205ENST00000473879 IGHV3-73A0A0B4J1V6 119 aa9.38□□□□□ -0.91
BRAT1-205ENST00000473879 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
BRAT1-205ENST00000473879 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
BRAT1-205ENST00000473879 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
BRAT1-205ENST00000473879 TRGV4A0A0C4DH28 118 aa9.37□□□□□ -0.91
BRAT1-205ENST00000473879 SMKR1H3BMG3 65 aa9.37□□□□□ -0.91
BRAT1-205ENST00000473879 IGHV3-53P01767 116 aa9.37□□□□□ -0.91
BRAT1-205ENST00000473879 ZNF479Q96JC4 524 aa9.37□□□□□ -0.91
BRAT1-205ENST00000473879 MAP1LC3AQ9H492 121 aa9.37□□□□□ -0.91
BRAT1-205ENST00000473879 CELA1Q9UNI1 258 aa9.37□□□□□ -0.91
BRAT1-205ENST00000473879 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
BRAT1-205ENST00000473879 TNFRSF6BO95407 300 aa9.36□□□□□ -0.91
BRAT1-205ENST00000473879 Q0VG73 95 aa9.36□□□□□ -0.91
BRAT1-205ENST00000473879 C18orf32Q8TCD1 76 aa9.36□□□□□ -0.91
BRAT1-205ENST00000473879 LINC00476Q8WZB0 136 aa9.36□□□□□ -0.91
BRAT1-205ENST00000473879 DNAH6Q9C0G6 4158 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 K7EQD1 137 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 M0QY20 66 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 NPYP01303 97 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 ATP5G1P05496 136 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 S100A6P06703 90 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 TCTAP57738 103 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 NRACQ8N912 160 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 C20orf78Q9BR46 151 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
BRAT1-205ENST00000473879 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 TRBV10-1A0A0K0K1A3 114 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 TRBV6-4A0A1B0GX49 114 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 GATA1P15976 413 aaPredicted RBP9.34□□□□□ -0.91
BRAT1-205ENST00000473879 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 Q6ZTC4 211 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
BRAT1-205ENST00000473879 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 BIRC6Q9NR09 4857 aa9.34□□□□□ -0.91
BRAT1-205ENST00000473879 TRBV6-5A0A0K0K1A5 114 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 LY6G6CO95867 125 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 PMCHP20382 165 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 NDUFA6P56556 154 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
BRAT1-205ENST00000473879 FHL2Q14192 279 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 RHOHQ15669 191 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 DNAJC30Q96LL9 226 aa9.33□□□□□ -0.92
BRAT1-205ENST00000473879 NXT2Q9NPJ8 142 aaKnown RBP9.33□□□□□ -0.92
BRAT1-205ENST00000473879 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
BRAT1-205ENST00000473879 IQCJQ1A5X6 159 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 Q6ZSN1 163 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 SLC25A29Q8N8R3 303 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 PRSS3P2Q8NHM4 247 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 TNFRSF18Q9Y5U5 241 aa9.32□□□□□ -0.92
BRAT1-205ENST00000473879 LOC389332A0A1B0GUA5 103 aa9.31□□□□□ -0.92
BRAT1-205ENST00000473879 IGLL5B9A064 214 aa9.31□□□□□ -0.92
BRAT1-205ENST00000473879 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
BRAT1-205ENST00000473879 COA6Q5JTJ3 125 aaKnown RBP9.31□□□□□ -0.92
BRAT1-205ENST00000473879 LGALS9CQ6DKI2 356 aa9.31□□□□□ -0.92
BRAT1-205ENST00000473879 FA2HQ7L5A8 372 aa9.31□□□□□ -0.92
BRAT1-205ENST00000473879 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
BRAT1-205ENST00000473879 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
BRAT1-205ENST00000473879 HHLA3Q9XRX5 114 aa9.31□□□□□ -0.92
BRAT1-205ENST00000473879 DEFB131BA0A096LNP1 70 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 P0DMU3 169 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 FAM231AP0DMU4 169 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 FAM231CP0DMU5 169 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 HTN3P15516 51 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 HOXA5P20719 270 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 RNASEKQ6P5S7 137 aaKnown RBP9.3□□□□□ -0.92
BRAT1-205ENST00000473879 Q8N8P6 123 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 NEXN-AS1Q8NBZ9 246 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
BRAT1-205ENST00000473879 APLNQ9ULZ1 77 aa9.3□□□□□ -0.92
BRAT1-205ENST00000473879 SDHAF1A6NFY7 115 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 F5H768 121 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 VCYO14598 125 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 SERF1AO75920 110 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 LINC00614P0C842 121 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 IFI27P40305 119 aaPredicted RBP9.29□□□□□ -0.92
BRAT1-205ENST00000473879 CRYBA4P53673 196 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 AP5S1Q9NUS5 200 aa9.29□□□□□ -0.92
BRAT1-205ENST00000473879 TRBV7-3A0A075B6L6 115 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 K7EMI3 77 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 TCAPO15273 167 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 PAX4O43316 350 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 HSBP1O75506 76 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 POLR2KP53803 58 aaKnown RBP9.28□□□□□ -0.92
BRAT1-205ENST00000473879 NIT1Q86X76 327 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
BRAT1-205ENST00000473879 IGLV2-18A0A075B6J9 118 aa9.27□□□□□ -0.93
BRAT1-205ENST00000473879 TRBV27A0A0K0K1C4 114 aa9.27□□□□□ -0.93
BRAT1-205ENST00000473879 I3L3M4 83 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms