RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CCL20P78556 96 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 ZNF90Q03938 601 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 WFDC2Q14508 124 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 SMIM21Q3B7S5 101 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 KHDC3LQ587J8 217 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 DHRS4L2Q6PKH6 230 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 C4orf22Q6V702 233 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 GOLT1AQ6ZVE7 132 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 KTN1-AS1Q86SY8 53 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 CLVS1Q8IUQ0 354 aaPredicted RBP1.21□□□□□ -2.22
CALD1-216ENST00000473714 NEK7Q8TDX7 302 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 GPR146Q96CH1 333 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 C20orf166-AS1Q96NR2 134 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 GPER1Q99527 375 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 RTL8AQ9BWD3 113 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 CST11Q9H112 138 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 RNASE7Q9H1E1 156 aaKnown RBP1.21□□□□□ -2.22
CALD1-216ENST00000473714 VCX3BQ9H321 246 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 RASL12Q9NYN1 266 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 TVP23BQ9NYZ1 205 aa1.21□□□□□ -2.22
CALD1-216ENST00000473714 TRGV4A0A0C4DH28 118 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 H7C1C5 153 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 H7C2G1 150 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 J3QRE1 110 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 K7EP13 123 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 M0R135 149 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 AIPO00170 330 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 HMGN4O00479 90 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 CYB5BO43169 146 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 ORC5O43913 435 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 MRPS14O60783 128 aaKnown RBP1.2□□□□□ -2.22
CALD1-216ENST00000473714 PFDN1O60925 122 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 IFNA7P01567 189 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 APOA2P02652 100 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 YPEL3P61236 119 aaPredicted RBP1.2□□□□□ -2.22
CALD1-216ENST00000473714 LCN6P62502 163 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 TDRG1Q3Y452 100 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 AKR1C8PQ5T2L2 129 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 TMEM42Q69YG0 159 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 HAGHLQ6PII5 290 aaPredicted RBP1.2□□□□□ -2.22
CALD1-216ENST00000473714 SPINK6Q6UWN8 80 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 SMIM15Q7Z3B0 74 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 CLECL1Q8IZS7 167 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 AQP3Q92482 292 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 DERL1Q9BUN8 251 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 CST9LQ9H4G1 147 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 PSORS1C2Q9UIG4 136 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 SSR3Q9UNL2 185 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 CYSLTR1Q9Y271 337 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 LHFPL6Q9Y693 200 aa1.2□□□□□ -2.22
CALD1-216ENST00000473714 IGHV3-64A0A075B6Q5 118 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 TRAV7A0A075B6U4 112 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 TRGV10A0A0A0MS01 117 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 A0A1B0GV72 72 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 TMEM238C9JI98 176 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 KPNA4O00629 521 aaPredicted RBP1.19□□□□□ -2.22
CALD1-216ENST00000473714 GGCTO75223 188 aaKnown RBP1.19□□□□□ -2.22
CALD1-216ENST00000473714 NDUFA3O95167 84 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 IGLV3-1P01715 115 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 FABP1P07148 127 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 CTSDP07339 412 aaPredicted RBP1.19□□□□□ -2.22
CALD1-216ENST00000473714 TRGC1P0CF51 173 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 DEFA4P12838 97 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 PHBP35232 272 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 TAS2R41P59536 307 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 NCALDP61601 193 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 HSPE1P61604 102 aaKnown RBP1.19□□□□□ -2.22
CALD1-216ENST00000473714 SLC38A11Q08AI6 406 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 INSL4Q14641 139 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 SNCBQ16143 134 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 LTC4SQ16873 150 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 TPRXLQ17RH7 258 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 ASB16-AS1Q495Z4 193 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 BCL2L15Q5TBC7 163 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 MIR17HGQ75NE6 70 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 HIST3H2BBQ8N257 126 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 STX19Q8N4C7 294 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.19□□□□□ -2.22
CALD1-216ENST00000473714 ZNF439Q8NDP4 499 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 OR4B1Q8NGF8 309 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 RASSF5Q8WWW0 418 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 USMG5Q96IX5 58 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 DNAJC30Q96LL9 226 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 C2orf50Q96LR7 162 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 AMELYQ99218 206 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 OSTCQ9NRP0 149 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 CKLFQ9UBR5 152 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 RBM7Q9Y580 266 aaKnown RBP1.19□□□□□ -2.22
CALD1-216ENST00000473714 MPC1Q9Y5U8 109 aa1.19□□□□□ -2.22
CALD1-216ENST00000473714 IGKV3-7A0A075B6H7 116 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 TMSB15BA0A087X1C1 80 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 PGRMC1O00264 195 aaKnown RBP1.18□□□□□ -2.22
CALD1-216ENST00000473714 SDCBPO00560 298 aaPredicted RBP1.18□□□□□ -2.22
CALD1-216ENST00000473714 ZNF682O95780 498 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 IGKV1-5P01602 117 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 TSPAN19P0C672 248 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 METTL15P1P0C7V9 234 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 IFI30P13284 250 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 DEFB131AP59861 70 aa1.18□□□□□ -2.22
CALD1-216ENST00000473714 GNG3P63215 75 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms