RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 UFSP1Q6NVU6 142 aa10.51□□□□□ -0.73
HIF3A-206ENST00000472815 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
HIF3A-206ENST00000472815 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 PLAC8L1A1L4L8 177 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 LINC01549A6NIU2 74 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 KRTAP10-11P60412 298 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 Q6ZTI0 123 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 IGHV3-73A0A0B4J1V6 119 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 SDHAF1A6NFY7 115 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 IGHV3-53P01767 116 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 S100A12P80511 92 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 DNAJC30Q96LL9 226 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 TNFRSF18Q9Y5U5 241 aa10.5□□□□□ -0.73
HIF3A-206ENST00000472815 C20orf202A1L168 122 aa10.49□□□□□ -0.73
HIF3A-206ENST00000472815 C3orf79P0CE67 100 aa10.49□□□□□ -0.73
HIF3A-206ENST00000472815 MIFP14174 115 aa10.49□□□□□ -0.73
HIF3A-206ENST00000472815 POLR2KP53803 58 aaKnown RBP10.49□□□□□ -0.73
HIF3A-206ENST00000472815 SAMD5Q5TGI4 173 aa10.49□□□□□ -0.73
HIF3A-206ENST00000472815 OR11H2Q8NH07 326 aa10.49□□□□□ -0.73
HIF3A-206ENST00000472815 X6R8D5 127 aa10.49□□□□□ -0.73
HIF3A-206ENST00000472815 TRBV27A0A0K0K1C4 114 aa10.48□□□□□ -0.73
HIF3A-206ENST00000472815 NUDT3O95989 172 aa10.48□□□□□ -0.73
HIF3A-206ENST00000472815 GAGE12BA1L429 117 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 LYRM9A8MSI8 78 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 G3V4G9 280 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 GAGE7O76087 117 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 EMP1P54849 157 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 RNF183Q96D59 192 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 I3L3M4 83 aa10.47□□□□□ -0.73
HIF3A-206ENST00000472815 A0A096LNJ9 63 aa10.46□□□□□ -0.74
HIF3A-206ENST00000472815 TRBV10-1A0A0K0K1A3 114 aa10.46□□□□□ -0.74
HIF3A-206ENST00000472815 ATP5LO75964 103 aa10.46□□□□□ -0.74
HIF3A-206ENST00000472815 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
HIF3A-206ENST00000472815 TP53TG1Q9Y2A0 90 aa10.46□□□□□ -0.74
HIF3A-206ENST00000472815 SYS1-DBNDD2H3BUS1 97 aa10.45□□□□□ -0.74
HIF3A-206ENST00000472815 IFI27L1Q96BM0 104 aa10.45□□□□□ -0.74
HIF3A-206ENST00000472815 ZNF479Q96JC4 524 aa10.45□□□□□ -0.74
HIF3A-206ENST00000472815 C18orf15Q96N68 181 aa10.45□□□□□ -0.74
HIF3A-206ENST00000472815 K7EQD1 137 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 RHOHQ15669 191 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 TEX48A0A1B0GUV7 120 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 RPL36AP83881 106 aaKnown RBP10.44□□□□□ -0.74
HIF3A-206ENST00000472815 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 RPL36ALQ969Q0 106 aaKnown RBP10.44□□□□□ -0.74
HIF3A-206ENST00000472815 CYSLTR1Q9Y271 337 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 MGAM2Q2M2H8 2515 aa10.44□□□□□ -0.74
HIF3A-206ENST00000472815 NEXN-AS1Q8NBZ9 246 aa10.43□□□□□ -0.74
HIF3A-206ENST00000472815 TOMM6Q96B49 74 aa10.43□□□□□ -0.74
HIF3A-206ENST00000472815 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
HIF3A-206ENST00000472815 TRBV6-4A0A1B0GX49 114 aa10.42□□□□□ -0.74
HIF3A-206ENST00000472815 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
HIF3A-206ENST00000472815 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
HIF3A-206ENST00000472815 LINC00173Q6ZV60 143 aa10.42□□□□□ -0.74
HIF3A-206ENST00000472815 TRBV7-3A0A075B6L6 115 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.41□□□□□ -0.74
HIF3A-206ENST00000472815 P0DMU3 169 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 FAM231AP0DMU4 169 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 FAM231CP0DMU5 169 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 C2orf66Q6UXQ4 117 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 Q6ZSN1 163 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 NEGR1Q7Z3B1 354 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 PRADC1Q9BSG0 188 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 H0Y8G0 127 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 TEX43Q6ZNM6 134 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 Q8NAQ8 132 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 SCGB3A1Q96QR1 104 aa10.41□□□□□ -0.74
HIF3A-206ENST00000472815 SPART-AS1P0CW21 52 aa10.4□□□□□ -0.74
HIF3A-206ENST00000472815 Q6ZN92 141 aa10.4□□□□□ -0.74
HIF3A-206ENST00000472815 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
HIF3A-206ENST00000472815 VAMP8Q9BV40 100 aa10.4□□□□□ -0.74
HIF3A-206ENST00000472815 DKK2Q9UBU2 259 aa10.4□□□□□ -0.74
HIF3A-206ENST00000472815 PRSS1P07477 247 aa10.39□□□□□ -0.75
HIF3A-206ENST00000472815 DAD1P61803 113 aa10.39□□□□□ -0.75
HIF3A-206ENST00000472815 COTL1Q14019 142 aa10.39□□□□□ -0.75
HIF3A-206ENST00000472815 LGALS9CQ6DKI2 356 aa10.39□□□□□ -0.75
HIF3A-206ENST00000472815 ERASQ7Z444 233 aa10.39□□□□□ -0.75
HIF3A-206ENST00000472815 DAZ4Q86SG3 579 aaKnown RBP10.39□□□□□ -0.75
HIF3A-206ENST00000472815 DAZ3Q9NR90 486 aaKnown RBP10.39□□□□□ -0.75
HIF3A-206ENST00000472815 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
HIF3A-206ENST00000472815 TSHBP01222 138 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 Q8N976 141 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 ZNRF2Q8NHG8 242 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 NOTCH1P46531 2555 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 TSTD3H0UI37 97 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
HIF3A-206ENST00000472815 CDPF1Q6NVV7 123 aa10.38□□□□□ -0.75
HIF3A-206ENST00000472815 FHL2Q14192 279 aa10.37□□□□□ -0.75
HIF3A-206ENST00000472815 TMEM141Q96I45 108 aa10.37□□□□□ -0.75
HIF3A-206ENST00000472815 HSBP1L1C9JCN9 74 aa10.36□□□□□ -0.75
HIF3A-206ENST00000472815 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
HIF3A-206ENST00000472815 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms