RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 FXYD2P54710 66 aa11.03□□□□□ -0.64
UBXN11-213ENST00000472155 MAP6D1Q9H9H5 199 aa11.03□□□□□ -0.64
UBXN11-213ENST00000472155 H7C1H1 209 aa11.02□□□□□ -0.65
UBXN11-213ENST00000472155 JMJD8Q96S16 334 aa11.02□□□□□ -0.65
UBXN11-213ENST00000472155 HLA-DRB4P13762 266 aa11.02□□□□□ -0.65
UBXN11-213ENST00000472155 HSD52Q0P140 79 aa11.02□□□□□ -0.65
UBXN11-213ENST00000472155 HLA-DRB4X5D2U9 266 aa11.02□□□□□ -0.65
UBXN11-213ENST00000472155 GCSHP23434 173 aa11.01□□□□□ -0.65
UBXN11-213ENST00000472155 DEFB114Q30KQ6 69 aa11.01□□□□□ -0.65
UBXN11-213ENST00000472155 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
UBXN11-213ENST00000472155 K7ERJ3 54 aa11.01□□□□□ -0.65
UBXN11-213ENST00000472155 DYNLRB2Q8TF09 96 aa11.01□□□□□ -0.65
UBXN11-213ENST00000472155 TRAV12-1A0A0B4J245 112 aa11□□□□□ -0.65
UBXN11-213ENST00000472155 IGIPA6NJ69 53 aa11□□□□□ -0.65
UBXN11-213ENST00000472155 OR4C5Q8NGB2 326 aa11□□□□□ -0.65
UBXN11-213ENST00000472155 SIVA1O15304 175 aa11□□□□□ -0.65
UBXN11-213ENST00000472155 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
UBXN11-213ENST00000472155 SEC11AP67812 179 aa10.99□□□□□ -0.65
UBXN11-213ENST00000472155 Q6ZSN1 163 aa10.99□□□□□ -0.65
UBXN11-213ENST00000472155 SMR3AQ99954 134 aa10.99□□□□□ -0.65
UBXN11-213ENST00000472155 PLNP26678 52 aa10.99□□□□□ -0.65
UBXN11-213ENST00000472155 PEMTQ9UBM1 199 aa10.99□□□□□ -0.65
UBXN11-213ENST00000472155 CYSLTR1Q9Y271 337 aa10.99□□□□□ -0.65
UBXN11-213ENST00000472155 IGLV4-69A0A075B6H9 119 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 TRBV27A0A0K0K1C4 114 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 H3BUT2 72 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 VCYO14598 125 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 CITED2Q99967 270 aaPredicted RBP10.98□□□□□ -0.65
UBXN11-213ENST00000472155 YAE1D1Q9NRH1 226 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 C11orf86A6NJI1 115 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 ODF3L2Q3SX64 289 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 HIVEP2P31629 2446 aa10.98□□□□□ -0.65
UBXN11-213ENST00000472155 PPP1R17O96001 155 aa10.97□□□□□ -0.65
UBXN11-213ENST00000472155 KIR2DL4Q99706 377 aa10.97□□□□□ -0.65
UBXN11-213ENST00000472155 SPAG8Q99932 426 aaPredicted RBP10.97□□□□□ -0.65
UBXN11-213ENST00000472155 XCL2Q9UBD3 114 aa10.96□□□□□ -0.65
UBXN11-213ENST00000472155 TRBV6-5A0A0K0K1A5 114 aa10.96□□□□□ -0.66
UBXN11-213ENST00000472155 A8MTW9 85 aa10.96□□□□□ -0.66
UBXN11-213ENST00000472155 AZU1P20160 251 aa10.96□□□□□ -0.66
UBXN11-213ENST00000472155 TRGV11A0A075B6L2 103 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 ZNRF2Q8NHG8 242 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 NBEAL2Q6ZNJ1 2754 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 TENM1Q9UKZ4 2725 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 IGHV3OR16-12A0A075B7B8 117 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 CCL24O00175 119 aa10.95□□□□□ -0.66
UBXN11-213ENST00000472155 RPL32P62910 135 aaKnown RBP10.95□□□□□ -0.66
UBXN11-213ENST00000472155 MRPL16Q9NX20 251 aaKnown RBP10.95□□□□□ -0.66
UBXN11-213ENST00000472155 TMEM86BQ8N661 226 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 LINC01006Q8NI28 216 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 WFDC10AQ9H1F0 79 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 CST9LQ9H4G1 147 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 HIGD1BQ9P298 99 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 A6NDN8 102 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 C9orf118A6NHY6 69 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 H3BRM9 83 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 CEMP1Q6PRD7 247 aaPredicted RBP10.94□□□□□ -0.66
UBXN11-213ENST00000472155 LINC01587Q99440 93 aa10.94□□□□□ -0.66
UBXN11-213ENST00000472155 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
UBXN11-213ENST00000472155 VPS25Q9BRG1 176 aa10.93□□□□□ -0.66
UBXN11-213ENST00000472155 NHP2Q9NX24 153 aaKnown RBP10.93□□□□□ -0.66
UBXN11-213ENST00000472155 OR11H12B2RN74 326 aa10.93□□□□□ -0.66
UBXN11-213ENST00000472155 FHL3Q13643 280 aa10.93□□□□□ -0.66
UBXN11-213ENST00000472155 TRPT1Q86TN4 253 aaKnown RBP10.93□□□□□ -0.66
UBXN11-213ENST00000472155 C11orf72Q8NBR9 251 aa10.93□□□□□ -0.66
UBXN11-213ENST00000472155 OR11H2Q8NH07 326 aa10.93□□□□□ -0.66
UBXN11-213ENST00000472155 TSPEAR-AS2P59090 65 aa10.92□□□□□ -0.66
UBXN11-213ENST00000472155 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
UBXN11-213ENST00000472155 UFSP1Q6NVU6 142 aa10.92□□□□□ -0.66
UBXN11-213ENST00000472155 CEND1Q8N111 149 aa10.92□□□□□ -0.66
UBXN11-213ENST00000472155 MYMXA0A1B0GTQ4 84 aa10.91□□□□□ -0.66
UBXN11-213ENST00000472155 J3QKU1 62 aa10.91□□□□□ -0.66
UBXN11-213ENST00000472155 PMVKQ15126 192 aa10.91□□□□□ -0.66
UBXN11-213ENST00000472155 E9PLD3 99 aa10.91□□□□□ -0.66
UBXN11-213ENST00000472155 SVIPQ8NHG7 77 aa10.91□□□□□ -0.66
UBXN11-213ENST00000472155 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
UBXN11-213ENST00000472155 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
UBXN11-213ENST00000472155 CFAP126Q5VTH2 177 aa10.9□□□□□ -0.66
UBXN11-213ENST00000472155 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
UBXN11-213ENST00000472155 M0R2P5 195 aa10.9□□□□□ -0.66
UBXN11-213ENST00000472155 C1orf158Q8N1D5 194 aa10.9□□□□□ -0.66
UBXN11-213ENST00000472155 C20orf203Q8NBC4 194 aa10.9□□□□□ -0.66
UBXN11-213ENST00000472155 HIST1H4GQ99525 98 aa10.9□□□□□ -0.66
UBXN11-213ENST00000472155 TRAV2A0A0B4J234 112 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 TMEM170BQ5T4T1 132 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 TM2D2Q9BX73 214 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 IGHV3-64A0A075B6Q5 118 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 I3L3M4 83 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 NSUN5P1Q3KNT7 163 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 OCIAD2Q56VL3 154 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 TRRAPQ9Y4A5 3859 aa10.89□□□□□ -0.67
UBXN11-213ENST00000472155 GAGE10A6NGK3 116 aa10.88□□□□□ -0.67
UBXN11-213ENST00000472155 SMIM13P0DJ93 91 aa10.88□□□□□ -0.67
UBXN11-213ENST00000472155 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms