RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CUBNO60494 3623 aa13.67□□□□□ -0.22
COL20A1-205ENST00000471582 SORL1Q92673 2214 aa13.67□□□□□ -0.22
COL20A1-205ENST00000471582 CD300EQ496F6 205 aaPredicted RBP13.66□□□□□ -0.22
COL20A1-205ENST00000471582 LINC00467Q9BRT7 94 aa13.66□□□□□ -0.22
COL20A1-205ENST00000471582 TMEM141Q96I45 108 aa13.66□□□□□ -0.22
COL20A1-205ENST00000471582 TP53TG1Q9Y2A0 90 aa13.66□□□□□ -0.22
COL20A1-205ENST00000471582 IGIPA6NJ69 53 aa13.65□□□□□ -0.22
COL20A1-205ENST00000471582 ZNF124Q15973 351 aa13.65□□□□□ -0.22
COL20A1-205ENST00000471582 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
COL20A1-205ENST00000471582 PTH2Q96A98 100 aa13.65□□□□□ -0.22
COL20A1-205ENST00000471582 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
COL20A1-205ENST00000471582 PRSS29PA6NIE9 313 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 RHOHQ15669 191 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 LINC01006Q8NI28 216 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 CYSRT1A8MQ03 144 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 PTTG1IPP53801 180 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
COL20A1-205ENST00000471582 CCL24O00175 119 aa13.63□□□□□ -0.23
COL20A1-205ENST00000471582 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
COL20A1-205ENST00000471582 CCL25O15444 150 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 ZNF415Q09FC8 603 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 TTTY13Q9BZ97 58 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 H3BRM9 83 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 TSHBP01222 138 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 CD28P10747 220 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 VAMP3Q15836 100 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 PAPPA-AS1Q5QFB9 102 aa13.62□□□□□ -0.23
COL20A1-205ENST00000471582 TSSC4Q9Y5U2 329 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-205ENST00000471582 A8MWV9 139 aa13.61□□□□□ -0.23
COL20A1-205ENST00000471582 M0R2P5 195 aa13.61□□□□□ -0.23
COL20A1-205ENST00000471582 INSP01308 110 aa13.61□□□□□ -0.23
COL20A1-205ENST00000471582 C11orf44Q8N8P7 122 aa13.61□□□□□ -0.23
COL20A1-205ENST00000471582 OR11H12B2RN74 326 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 PMVKQ15126 192 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 OR11H2Q8NH07 326 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 TRAV8-6A0A0B4J262 113 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 NDUFA7O95182 113 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 HTN1P15515 57 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 ODF3L2Q3SX64 289 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 HIST2H2BDQ6DRA6 164 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 NF1P21359 2839 aa13.6□□□□□ -0.23
COL20A1-205ENST00000471582 A0A1W2PRX2 142 aa13.59□□□□□ -0.23
COL20A1-205ENST00000471582 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
COL20A1-205ENST00000471582 E9PLD3 99 aa13.59□□□□□ -0.23
COL20A1-205ENST00000471582 I3L3M4 83 aa13.59□□□□□ -0.23
COL20A1-205ENST00000471582 RPL39P62891 51 aaKnown RBP13.59□□□□□ -0.23
COL20A1-205ENST00000471582 TAL2Q16559 108 aa13.58□□□□□ -0.23
COL20A1-205ENST00000471582 UFSP1Q6NVU6 142 aa13.58□□□□□ -0.23
COL20A1-205ENST00000471582 MAPKAPK5-AS1Q8N8E1 139 aa13.58□□□□□ -0.23
COL20A1-205ENST00000471582 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.23
COL20A1-205ENST00000471582 C11orf72Q8NBR9 251 aa13.58□□□□□ -0.24
COL20A1-205ENST00000471582 SPXQ9BT56 116 aa13.58□□□□□ -0.24
COL20A1-205ENST00000471582 CST9LQ9H4G1 147 aa13.58□□□□□ -0.24
COL20A1-205ENST00000471582 IGLV4-69A0A075B6H9 119 aa13.57□□□□□ -0.24
COL20A1-205ENST00000471582 LINC01587Q99440 93 aa13.57□□□□□ -0.24
COL20A1-205ENST00000471582 TM2D2Q9BX73 214 aa13.57□□□□□ -0.24
COL20A1-205ENST00000471582 NSD1Q96L73 2696 aaPredicted RBP13.57□□□□□ -0.24
COL20A1-205ENST00000471582 C9orf118A6NHY6 69 aa13.56□□□□□ -0.24
COL20A1-205ENST00000471582 F8P00451 2351 aa13.56□□□□□ -0.24
COL20A1-205ENST00000471582 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
COL20A1-205ENST00000471582 GCSHP23434 173 aa13.56□□□□□ -0.24
COL20A1-205ENST00000471582 C20orf203Q8NBC4 194 aa13.56□□□□□ -0.24
COL20A1-205ENST00000471582 RHODO00212 210 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 P0DMU3 169 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 FAM231AP0DMU4 169 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 FAM231CP0DMU5 169 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 BEAN1Q3B7T3 259 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 AMMECR1LQ6DCA0 310 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 STHQ8IWL8 128 aa13.55□□□□□ -0.24
COL20A1-205ENST00000471582 CEND1Q8N111 149 aa13.54□□□□□ -0.24
COL20A1-205ENST00000471582 PRADC1Q9BSG0 188 aa13.54□□□□□ -0.24
COL20A1-205ENST00000471582 C11orf86A6NJI1 115 aa13.54□□□□□ -0.24
COL20A1-205ENST00000471582 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
COL20A1-205ENST00000471582 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
COL20A1-205ENST00000471582 FXYD2P54710 66 aa13.53□□□□□ -0.24
COL20A1-205ENST00000471582 HERVK_113P61574 105 aa13.53□□□□□ -0.24
COL20A1-205ENST00000471582 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
COL20A1-205ENST00000471582 DEFB104AQ8WTQ1 72 aa13.53□□□□□ -0.24
COL20A1-205ENST00000471582 PRM2P04554 102 aa13.52□□□□□ -0.25
COL20A1-205ENST00000471582 SMIM13P0DJ93 91 aa13.52□□□□□ -0.25
COL20A1-205ENST00000471582 PROK1P58294 105 aa13.52□□□□□ -0.25
COL20A1-205ENST00000471582 CRLF1O75462 422 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 TNFRSF18Q9Y5U5 241 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 IGHV3-73A0A0B4J1V6 119 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 NFE4Q86UQ8 179 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 FAM110AQ9BQ89 295 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 XCL2Q9UBD3 114 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 PYGO1Q9Y3Y4 419 aa13.51□□□□□ -0.25
COL20A1-205ENST00000471582 RS1O15537 224 aa13.5□□□□□ -0.25
COL20A1-205ENST00000471582 IGHV3-53P01767 116 aa13.5□□□□□ -0.25
COL20A1-205ENST00000471582 FN1P02751 2386 aaKnown RBP13.49□□□□□ -0.25
COL20A1-205ENST00000471582 MAST4O15021 2626 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 IL17DQ8TAD2 202 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 DNAJC30Q96LL9 226 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 NACAE9PAV3 2078 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 TRBV7-3A0A075B6L6 115 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 H3BUT2 72 aa13.49□□□□□ -0.25
COL20A1-205ENST00000471582 ZNRF2Q8NHG8 242 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms