RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 UQCC3Q6UW78 93 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 SMIM15Q7Z3B0 74 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 C6orf223Q8N319 242 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 NUP35Q8NFH5 326 aa12.06□□□□□ -0.48
VPS72-204ENST00000471423 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
VPS72-204ENST00000471423 COMMD7Q86VX2 200 aa12.05□□□□□ -0.48
VPS72-204ENST00000471423 NAT8BQ9UHF3 227 aa12.05□□□□□ -0.48
VPS72-204ENST00000471423 HECTD4Q9Y4D8 3996 aa12.04□□□□□ -0.48
VPS72-204ENST00000471423 A0A087WWC5 75 aa12.04□□□□□ -0.48
VPS72-204ENST00000471423 PNRC1Q12796 327 aaPredicted RBP12.04□□□□□ -0.48
VPS72-204ENST00000471423 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
VPS72-204ENST00000471423 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
VPS72-204ENST00000471423 SMIM27A0A1W2PRY6 76 aa12.03□□□□□ -0.48
VPS72-204ENST00000471423 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
VPS72-204ENST00000471423 RASL11AQ6T310 242 aa12.03□□□□□ -0.48
VPS72-204ENST00000471423 TNFRSF18Q9Y5U5 241 aa12.03□□□□□ -0.48
VPS72-204ENST00000471423 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
VPS72-204ENST00000471423 ADCYAP1P18509 176 aa12.02□□□□□ -0.49
VPS72-204ENST00000471423 GATD1Q8NB37 220 aa12.02□□□□□ -0.49
VPS72-204ENST00000471423 DNAJC30Q96LL9 226 aa12.02□□□□□ -0.49
VPS72-204ENST00000471423 TMEM218A2RU14 115 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 PRSS29PA6NIE9 313 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 IGHV3-30P01768 117 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 IGHV3-33P01772 117 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 IGHV3-30-3P0DP02 117 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 IGHV3-30-5P0DP03 117 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 RIGQ13278 110 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 Q8N3U1 123 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.01□□□□□ -0.49
VPS72-204ENST00000471423 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
VPS72-204ENST00000471423 LINC00862A6NCI5 91 aa12□□□□□ -0.49
VPS72-204ENST00000471423 F8W036 122 aa12□□□□□ -0.49
VPS72-204ENST00000471423 K7EP13 123 aa12□□□□□ -0.49
VPS72-204ENST00000471423 PPP1R2P9O14990 202 aa12□□□□□ -0.49
VPS72-204ENST00000471423 DAZ4Q86SG3 579 aaKnown RBP12□□□□□ -0.49
VPS72-204ENST00000471423 TMEM191AQ9H0A3 160 aa12□□□□□ -0.49
VPS72-204ENST00000471423 DAZ3Q9NR90 486 aaKnown RBP12□□□□□ -0.49
VPS72-204ENST00000471423 PKD1P98161 4303 aa11.99□□□□□ -0.49
VPS72-204ENST00000471423 TRBV6-8A0A0A6YYG3 113 aa11.99□□□□□ -0.49
VPS72-204ENST00000471423 BTF3P20290 206 aaKnown RBP11.99□□□□□ -0.49
VPS72-204ENST00000471423 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
VPS72-204ENST00000471423 DNAH11Q96DT5 4516 aa11.98□□□□□ -0.49
VPS72-204ENST00000471423 AMN1Q8IY45 258 aa11.98□□□□□ -0.49
VPS72-204ENST00000471423 RPL39LQ96EH5 51 aaKnown RBP11.98□□□□□ -0.49
VPS72-204ENST00000471423 BIRC6Q9NR09 4857 aa11.98□□□□□ -0.49
VPS72-204ENST00000471423 MT-ND4LP03901 98 aa11.97□□□□□ -0.49
VPS72-204ENST00000471423 TNP2Q05952 138 aa11.97□□□□□ -0.49
VPS72-204ENST00000471423 MRPL54Q6P161 138 aaKnown RBP11.97□□□□□ -0.49
VPS72-204ENST00000471423 NTM-AS1Q6ZSK4 140 aa11.97□□□□□ -0.49
VPS72-204ENST00000471423 NIT1Q86X76 327 aa11.97□□□□□ -0.49
VPS72-204ENST00000471423 ANAPC16Q96DE5 110 aa11.97□□□□□ -0.49
VPS72-204ENST00000471423 RNF185Q96GF1 192 aa11.97□□□□□ -0.49
VPS72-204ENST00000471423 CAMPP49913 170 aa11.96□□□□□ -0.49
VPS72-204ENST00000471423 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
VPS72-204ENST00000471423 FRZBQ92765 325 aa11.96□□□□□ -0.49
VPS72-204ENST00000471423 SEC11CQ9BY50 192 aa11.96□□□□□ -0.49
VPS72-204ENST00000471423 A0A1B0GW15 77 aa11.95□□□□□ -0.5
VPS72-204ENST00000471423 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
VPS72-204ENST00000471423 GAS8-AS1O95177 125 aa11.95□□□□□ -0.5
VPS72-204ENST00000471423 RAB4AP20338 218 aa11.95□□□□□ -0.5
VPS72-204ENST00000471423 Q6ZRN7 208 aaPredicted RBP11.95□□□□□ -0.5
VPS72-204ENST00000471423 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
VPS72-204ENST00000471423 URGCP-MRPS24S4R325 110 aa11.95□□□□□ -0.5
VPS72-204ENST00000471423 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
VPS72-204ENST00000471423 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
VPS72-204ENST00000471423 HBBP68871 147 aa11.94□□□□□ -0.5
VPS72-204ENST00000471423 KCNIP4Q6PIL6 250 aa11.94□□□□□ -0.5
VPS72-204ENST00000471423 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
VPS72-204ENST00000471423 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
VPS72-204ENST00000471423 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
VPS72-204ENST00000471423 A0A087WX48 190 aa11.93□□□□□ -0.5
VPS72-204ENST00000471423 A0A1B0GXF2 115 aa11.93□□□□□ -0.5
VPS72-204ENST00000471423 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
VPS72-204ENST00000471423 Q9HAA7 133 aa11.93□□□□□ -0.5
VPS72-204ENST00000471423 DYNC1H1Q14204 4646 aaKnown RBP11.93□□□□□ -0.5
VPS72-204ENST00000471423 IGHV1-24A0A0C4DH33 117 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 NCR2O95944 276 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 LAGE3Q14657 143 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 IQCJQ1A5X6 159 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 CHCHD7Q9BUK0 85 aa11.92□□□□□ -0.5
VPS72-204ENST00000471423 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
VPS72-204ENST00000471423 S100A8P05109 93 aa11.91□□□□□ -0.5
VPS72-204ENST00000471423 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
VPS72-204ENST00000471423 COTL1Q14019 142 aa11.91□□□□□ -0.5
VPS72-204ENST00000471423 MPV17L2Q567V2 206 aa11.91□□□□□ -0.5
VPS72-204ENST00000471423 FAM104BQ5XKR9 115 aa11.91□□□□□ -0.5
VPS72-204ENST00000471423 ATP5L2Q7Z4Y8 100 aa11.91□□□□□ -0.5
VPS72-204ENST00000471423 TRBV6-5A0A0K0K1A5 114 aa11.9□□□□□ -0.5
VPS72-204ENST00000471423 GAGE6Q13070 117 aa11.9□□□□□ -0.5
VPS72-204ENST00000471423 MRPL51Q4U2R6 128 aaKnown RBP11.9□□□□□ -0.5
VPS72-204ENST00000471423 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.5
VPS72-204ENST00000471423 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
VPS72-204ENST00000471423 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
VPS72-204ENST00000471423 ST20Q9HBF5 79 aa11.89□□□□□ -0.51
VPS72-204ENST00000471423 CARHSP1Q9Y2V2 147 aaKnown RBP11.89□□□□□ -0.51
VPS72-204ENST00000471423 AMTP48728 403 aa11.88□□□□□ -0.51
VPS72-204ENST00000471423 PKIAP61925 76 aa11.88□□□□□ -0.51
VPS72-204ENST00000471423 CTDSP1Q9GZU7 261 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms