RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 KPRPQ5T749 579 aaPredicted RBP8.54□□□□□ -1.04
LINC00880-201ENST00000471357 Q6ZSN1 163 aa8.54□□□□□ -1.04
LINC00880-201ENST00000471357 CIDEAO60543 219 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
LINC00880-201ENST00000471357 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
LINC00880-201ENST00000471357 TMEM70Q9BUB7 260 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 TP53TG1Q9Y2A0 90 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 LYRM9A8MSI8 78 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 PRB2P02812 416 aaPredicted RBP8.53□□□□□ -1.04
LINC00880-201ENST00000471357 LINC00612Q8N6U2 182 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 Q8NAQ8 132 aa8.53□□□□□ -1.04
LINC00880-201ENST00000471357 VCYO14598 125 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 TCAPO15273 167 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 P0DMU3 169 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 FAM231AP0DMU4 169 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 FAM231CP0DMU5 169 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 DEFB130BP0DP73 79 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 DEFB130AP0DP74 79 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 LAGE3Q14657 143 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 FAM222AQ5U5X8 452 aa8.52□□□□□ -1.05
LINC00880-201ENST00000471357 A0A096LNJ9 63 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 K7EMI3 77 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 DEFB4AO15263 64 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 C18orf15Q96N68 181 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 HBDP02042 147 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 FCER1GP30273 86 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 NEGR1Q7Z3B1 354 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 TNFRSF18Q9Y5U5 241 aa8.51□□□□□ -1.05
LINC00880-201ENST00000471357 NOTCH1P46531 2555 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 K7EIL1 84 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 ORMDL2Q53FV1 153 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 PYY3Q5JQD4 70 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 DNAJC30Q96LL9 226 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 DKK2Q9UBU2 259 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 MGAM2Q2M2H8 2515 aa8.5□□□□□ -1.05
LINC00880-201ENST00000471357 KRTDAPP60985 99 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 NEXN-AS1Q8NBZ9 246 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 RETNQ9HD89 108 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 Q9UF83 564 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 TRGV4A0A0C4DH28 118 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 K7EQD1 137 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 SMIM6P0DI80 62 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 JOSD1Q15040 202 aaPredicted RBP8.49□□□□□ -1.05
LINC00880-201ENST00000471357 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 SLC25A29Q8N8R3 303 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 HSPB8Q9UJY1 196 aa8.49□□□□□ -1.05
LINC00880-201ENST00000471357 TRBV10-1A0A0K0K1A3 114 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 I3L3M4 83 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 NUDT3O95989 172 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 C3orf79P0CE67 100 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 SPART-AS1P0CW21 52 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 FHL2Q14192 279 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 LINC00173Q6ZV60 143 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 LINC00518Q8N0U6 118 aa8.48□□□□□ -1.05
LINC00880-201ENST00000471357 TRBV6-4A0A1B0GX49 114 aa8.47□□□□□ -1.05
LINC00880-201ENST00000471357 BTF3P20290 206 aaKnown RBP8.47□□□□□ -1.05
LINC00880-201ENST00000471357 SBSPONQ8IVN8 264 aa8.47□□□□□ -1.05
LINC00880-201ENST00000471357 SCGB1D1O95968 90 aa8.47□□□□□ -1.05
LINC00880-201ENST00000471357 DAD1P61803 113 aa8.47□□□□□ -1.05
LINC00880-201ENST00000471357 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
LINC00880-201ENST00000471357 CELA1Q9UNI1 258 aa8.47□□□□□ -1.05
LINC00880-201ENST00000471357 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.05
LINC00880-201ENST00000471357 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.05
LINC00880-201ENST00000471357 ZNRF2Q8NHG8 242 aa8.46□□□□□ -1.05
LINC00880-201ENST00000471357 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.05
LINC00880-201ENST00000471357 C12orf57Q99622 126 aa8.46□□□□□ -1.05
LINC00880-201ENST00000471357 MAP1LC3CQ9BXW4 147 aa8.46□□□□□ -1.05
LINC00880-201ENST00000471357 NBEAL1Q6ZS30 2694 aa8.46□□□□□ -1.06
LINC00880-201ENST00000471357 TRBV7-3A0A075B6L6 115 aa8.46□□□□□ -1.06
LINC00880-201ENST00000471357 G0S2P27469 103 aa8.46□□□□□ -1.06
LINC00880-201ENST00000471357 RHOHQ15669 191 aa8.46□□□□□ -1.06
LINC00880-201ENST00000471357 TEX48A0A1B0GUV7 120 aa8.45□□□□□ -1.06
LINC00880-201ENST00000471357 TSHBP01222 138 aa8.45□□□□□ -1.06
LINC00880-201ENST00000471357 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
LINC00880-201ENST00000471357 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
LINC00880-201ENST00000471357 GAGE12JA6NER3 117 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 SYS1-DBNDD2H3BUS1 97 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 GAGE1Q13065 139 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 GAGE4Q13068 117 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 GAGE5Q13069 117 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 GAGE13Q4V321 117 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 C2orf66Q6UXQ4 117 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 PHLDA1Q8WV24 401 aaPredicted RBP8.44□□□□□ -1.06
LINC00880-201ENST00000471357 TOMM6Q96B49 74 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 IFI27L1Q96BM0 104 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 SPATA25Q9BR10 227 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 MRAPQ8TCY5 172 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 C11orf68Q9H3H3 251 aaKnown RBP8.44□□□□□ -1.06
LINC00880-201ENST00000471357 CYSLTR1Q9Y271 337 aa8.44□□□□□ -1.06
LINC00880-201ENST00000471357 IGHV3-38A0A0C4DH36 116 aa8.43□□□□□ -1.06
LINC00880-201ENST00000471357 LINC01549A6NIU2 74 aa8.43□□□□□ -1.06
LINC00880-201ENST00000471357 ATP5LO75964 103 aa8.43□□□□□ -1.06
LINC00880-201ENST00000471357 ATP5G1P05496 136 aa8.43□□□□□ -1.06
LINC00880-201ENST00000471357 UBE2D3P61077 147 aa8.43□□□□□ -1.06
LINC00880-201ENST00000471357 UBE2D2P62837 147 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms