RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 C9JQL5 133 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 H7C1H1 209 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 TCRAP04437 139 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 SFTA3P0C7M3 94 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 TMEM241Q24JQ0 296 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 KRTAP21-3Q3LHN1 58 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 C10orf91Q5T1B1 145 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 CAMK2N1Q7Z7J9 78 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 CYB561D1Q8N8Q1 229 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 FMC1Q96HJ9 113 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 LINC00477Q96M19 166 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 LINC00052Q96N35 136 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 SEC11CQ9BY50 192 aa3.16□□□□□ -1.9
CCDC39-202ENST00000471307 SPANXB1Q9NS25 103 aaPredicted RBP3.16□□□□□ -1.9
CCDC39-202ENST00000471307 IZUMO1RA6ND01 250 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF727A8MUV8 499 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF705FA8MVS1 300 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-202ENST00000471307 C9JCJ5 164 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 F8W036 122 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 M0R3E3 92 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF688P0C7X2 276 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 S100A1P23297 94 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 AKR1C3P42330 323 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 RPL35P42766 123 aaKnown RBP3.15□□□□□ -1.91
CCDC39-202ENST00000471307 RPS10P46783 165 aaKnown RBP3.15□□□□□ -1.91
CCDC39-202ENST00000471307 PSMB2P49721 201 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 CEBPGP53567 150 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 UBE2G1P62253 170 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 GNG5P63218 68 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 FLI1Q01543 452 aaPredicted RBP3.15□□□□□ -1.91
CCDC39-202ENST00000471307 GUCA2BQ16661 112 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM183BQ1AE95 376 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 PSMG4Q5JS54 123 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 SAPCD1Q5SSQ6 148 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM78Q5T7P6 136 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 EBLN2Q6P2I7 272 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 FOXI2Q6ZQN5 318 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 GOLT1AQ6ZVE7 132 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 BAGE2Q86Y30 109 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 BOD1L2Q8IYS8 172 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 RNF182Q8N6D2 247 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM75Q8N9X5 138 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 OR8A1Q8NGG7 326 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 SMIM12Q96EX1 92 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 SMIM7Q9BQ49 75 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 BIN3Q9NQY0 253 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 NAT8Q9UHE5 227 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 PSG8Q9UQ74 426 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 ZFP30Q9Y2G7 519 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 CARHSP1Q9Y2V2 147 aaKnown RBP3.15□□□□□ -1.91
CCDC39-202ENST00000471307 LENEPQ9Y5L5 61 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 LY96Q9Y6Y9 160 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.91
CCDC39-202ENST00000471307 IGKV2-40A0A087WW87 121 aaPredicted RBP3.14□□□□□ -1.91
CCDC39-202ENST00000471307 A0A0J9YX75 114 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 LRCOL1A6NCL2 159 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 OR11H12B2RN74 326 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 B4DEV8 164 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 LTAP01374 205 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 IGKV2D-40P01614 121 aaPredicted RBP3.14□□□□□ -1.91
CCDC39-202ENST00000471307 GNG4P50150 75 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF138P52744 262 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 DEFB131AP59861 70 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 TMEM183AQ8IXX5 376 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 FAM24BQ8N5W8 94 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 TVP23CQ96ET8 276 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 ODF3Q96PU9 254 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 NDFIP1Q9BT67 221 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 DERL1Q9BUN8 251 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 AGPAT4-IT1Q9H0P7 198 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 ZNF492Q9P255 531 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 NAGKQ9UJ70 344 aa3.14□□□□□ -1.91
CCDC39-202ENST00000471307 TRBV20OR9-2A0A075B6H5 130 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 TRAV8-1A0A0A6YYK1 113 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 A8MTW9 85 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 H3BMM0 161 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 M0QXV9 152 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 IGLV2-8P01709 118 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 APOC3P02656 99 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 HLA-DRB4P13762 266 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 ADCYAP1P18509 176 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 TSPOP30536 169 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 RPL23P62829 140 aaKnown RBP3.13□□□□□ -1.91
CCDC39-202ENST00000471307 HIST1H1AQ02539 215 aaPredicted RBP3.13□□□□□ -1.91
CCDC39-202ENST00000471307 ERCC8Q13216 396 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 CENPWQ5EE01 88 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 LINC00173Q6ZV60 143 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 PRNTQ86SH4 94 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 Q86TA4 180 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 LINC01551Q86U37 167 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 SVBPQ8N300 66 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 FAM19A4Q96LR4 140 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 IGF2BP2-AS1Q96M15 143 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 HLA-DRB4X5D2U9 266 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 ANK2Q01484 3957 aa3.13□□□□□ -1.91
CCDC39-202ENST00000471307 A0A087WWC5 75 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms