RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 DIP2CQ9Y2E4 1556 aa2.19□□□□□ -2.06
COL11A1-208ENST00000470170 PRDM15P57071 1507 aaPredicted RBP2.18□□□□□ -2.06
COL11A1-208ENST00000470170 ABCA5Q8WWZ7 1642 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 CICQ96RK0 1608 aaPredicted RBP2.18□□□□□ -2.06
COL11A1-208ENST00000470170 RICTORQ6R327 1708 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 HCG22E2RYF7 251 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 NUPR1O60356 82 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 SMIM11AP58511 58 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 IGFBP7Q16270 282 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 DEFB113Q30KQ7 82 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 ZCCHC23Q6ZST2 131 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 NXT2Q9NPJ8 142 aaKnown RBP2.18□□□□□ -2.06
COL11A1-208ENST00000470170 GOLGA3Q08378 1498 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 PCNTO95613 3336 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 MCM3APO60318 1980 aa2.18□□□□□ -2.06
COL11A1-208ENST00000470170 DISP1Q96F81 1524 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 ABCA3Q99758 1704 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 TRPM6Q9BX84 2022 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 MUC21A0A140T8X8 626 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 A0A1W2PPM0 123 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 SYS1-DBNDD2H3BUS1 97 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 IGLC2P0DOY2 106 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 IGLC3P0DOY3 106 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.17□□□□□ -2.06
COL11A1-208ENST00000470170 ZNF833PQ6ZTB9 187 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 Q6ZTI0 123 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 DEFB123Q8N688 67 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 Q8TAT8 98 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 C22orf24Q9Y442 160 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 USP54Q70EL1 1684 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 KIDINS220Q9ULH0 1771 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 THADAQ6YHU6 1953 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 LCTP09848 1927 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 ABCA9Q8IUA7 1624 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 ADGRB3O60242 1522 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 SLIT2O94813 1529 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 EEA1Q15075 1411 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 ANKARQ7Z5J8 1434 aa2.17□□□□□ -2.06
COL11A1-208ENST00000470170 SHANK1Q9Y566 2161 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 MROH2AA6NES4 1674 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 WIZO95785 1651 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 UGGT1Q9NYU2 1555 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 NKTRP30414 1462 aaKnown RBP2.16□□□□□ -2.06
COL11A1-208ENST00000470170 PXDNQ92626 1479 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 NLRP1Q9C000 1473 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 TMEM30CPA0ZSE6 113 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 SIX6O95475 246 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 CFDP00746 253 aaPredicted RBP2.16□□□□□ -2.06
COL11A1-208ENST00000470170 IGHV3-33P01772 117 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 ETDBQ3ZM63 59 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 TIMM21Q9BVV7 248 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 LINC00474Q9P2X8 69 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 HEATR5AQ86XA9 2040 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 PSME4Q14997 1843 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 SBF2Q86WG5 1849 aa2.16□□□□□ -2.06
COL11A1-208ENST00000470170 STRCP1A6NGW2 1772 aa2.15□□□□□ -2.06
COL11A1-208ENST00000470170 CHD3Q12873 2000 aaKnown RBP2.15□□□□□ -2.06
COL11A1-208ENST00000470170 TIAM1Q13009 1591 aa2.15□□□□□ -2.06
COL11A1-208ENST00000470170 KIF20BQ96Q89 1820 aa2.15□□□□□ -2.06
COL11A1-208ENST00000470170 TNRC18O15417 2968 aaPredicted RBP2.15□□□□□ -2.07
COL11A1-208ENST00000470170 TRAV23DV6A0A075B6W5 121 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 TRBV7-1A0A0A6YYK4 115 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 CXorf51AA0A1B0GTR3 108 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 C2orf70A6NJV1 201 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 BCE1O60756 84 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 PRB4P10163 310 aaPredicted RBP2.15□□□□□ -2.07
COL11A1-208ENST00000470170 PDE6HQ13956 83 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 ELOBQ15370 118 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 PYDC2Q56P42 97 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 NMSQ5H8A3 153 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 BVES-AS1Q5T3Y7 98 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 KRTAP26-1Q6PEX3 210 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 CYP2G1PQ6ZSU1 146 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 C9orf163Q8N9P6 203 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 ZCCHC13Q8WW36 166 aaKnown RBP2.15□□□□□ -2.07
COL11A1-208ENST00000470170 MANBALQ9NQG1 85 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 MROH1Q8NDA8 1641 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 MYLKQ15746 1914 aa2.15□□□□□ -2.07
COL11A1-208ENST00000470170 SCN4AP35499 1836 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 PARP14Q460N5 1801 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 SLX4Q8IY92 1834 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 MGAMO43451 1857 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 DOCK1Q14185 1865 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 PPLO60437 1756 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 NEXMIFQ5QGS0 1516 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 ASXL1Q8IXJ9 1541 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 ACYP1P07311 99 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 SNRPFP62306 86 aaKnown RBP2.14□□□□□ -2.07
COL11A1-208ENST00000470170 CNBPP62633 177 aaKnown RBP2.14□□□□□ -2.07
COL11A1-208ENST00000470170 LYPD5Q6UWN5 251 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 ZNF818PQ6ZRF7 136 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 PRO2289Q9P1D8 64 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 ZSWIM8A7E2V4 1837 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 NCOA2Q15596 1464 aa2.14□□□□□ -2.07
COL11A1-208ENST00000470170 SCN3AQ9NY46 2000 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 TRAV12-3A0A0B4J271 114 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 TRBV10-1A0A0K0K1A3 114 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 A0A1W2PNM2 257 aa2.13□□□□□ -2.07
COL11A1-208ENST00000470170 CTSGP08311 255 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms