RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 HIST1H2BOP23527 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BBP33778 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BDP58876 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BCP62807 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 Q0VG73 95 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST2H2BEQ16778 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-204ENST00000469232 SUMO4Q6EEV6 95 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 ORMDL3Q8N138 153 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BHQ93079 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BNQ99877 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HIST1H2BMQ99879 126 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
NPHP3-204ENST00000469232 D6R8Y8 96 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 GAS8-AS1O95177 125 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 HOXA5P20719 270 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 POLR2KP53803 58 aaKnown RBP5.74□□□□□ -1.49
NPHP3-204ENST00000469232 EMP1P54849 157 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 SSTP61278 116 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 C20orf78Q9BR46 151 aa5.74□□□□□ -1.49
NPHP3-204ENST00000469232 IGLV2-18A0A075B6J9 118 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 TRGV2A0A075B6R0 118 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 C1orf196B1AJZ1 125 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 H3BNG1 76 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 H7C1H1 209 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 NPYP01303 97 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 ATP5G1P05496 136 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 CKS2P33552 79 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 DAD1P61803 113 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 KIAA1644Q3SXP7 199 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 OR10J3Q5JRS4 329 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 C18orf32Q8TCD1 76 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 DNAJC30Q96LL9 226 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 PRELID3AQ96N28 172 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 NIT2Q9NQR4 276 aa5.73□□□□□ -1.49
NPHP3-204ENST00000469232 TNFRSF6BO95407 300 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 DEFB130BP0DP73 79 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 DEFB130AP0DP74 79 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 SRIP30626 198 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 CRYBA4P53673 196 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 FAM74A4Q5TZK3 123 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 SLC25A29Q8N8R3 303 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 PRO0255Q9UI72 69 aa5.72□□□□□ -1.49
NPHP3-204ENST00000469232 TRAV26-2A0A0B4J265 109 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 TRBV27A0A0K0K1C4 114 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 SMKR1H3BMG3 65 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 K7EQD1 137 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 NCR2O95944 276 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 MGPP08493 103 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 ESDP10768 282 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 LINC00310P59036 64 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 ZNF56Q15929 161 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.71□□□□□ -1.5
NPHP3-204ENST00000469232 NEXN-AS1Q8NBZ9 246 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 C11orf45Q8TAV5 145 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 URB1-AS1Q96HZ7 61 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 Q9UF83 564 aa5.71□□□□□ -1.5
NPHP3-204ENST00000469232 K7EMI3 77 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 RAB5BP61020 215 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 SUMO2P61956 95 aaKnown RBP5.7□□□□□ -1.5
NPHP3-204ENST00000469232 RHOHQ15669 191 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 RPL39LQ96EH5 51 aaKnown RBP5.7□□□□□ -1.5
NPHP3-204ENST00000469232 VSIG2Q96IQ7 327 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 TMEM70Q9BUB7 260 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 HHLA3Q9XRX5 114 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 IGHV3-73A0A0B4J1V6 119 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 F5H697 171 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 P0DMU3 169 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 FAM231AP0DMU4 169 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 FAM231CP0DMU5 169 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 UBE2D3P61077 147 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 UBE2D2P62837 147 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 Q6ZTC4 211 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 Q8N8P6 123 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 SMIM2Q9BVW6 85 aa5.7□□□□□ -1.5
NPHP3-204ENST00000469232 DNAH7Q8WXX0 4024 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 TRBV7-3A0A075B6L6 115 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 TRAV26-1A0A087WT03 109 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 TRGV4A0A0C4DH28 118 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 SDHAF1A6NFY7 115 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 NANOS2P60321 138 aaKnown RBP5.69□□□□□ -1.5
NPHP3-204ENST00000469232 MAP1LC3AQ9H492 121 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 ST20Q9HBF5 79 aa5.69□□□□□ -1.5
NPHP3-204ENST00000469232 NXT2Q9NPJ8 142 aaKnown RBP5.69□□□□□ -1.5
NPHP3-204ENST00000469232 TRAV10A0A0B4J240 114 aa5.68□□□□□ -1.5
NPHP3-204ENST00000469232 VCYO14598 125 aa5.68□□□□□ -1.5
NPHP3-204ENST00000469232 TIRAPP58753 221 aa5.68□□□□□ -1.5
NPHP3-204ENST00000469232 CHCHD1Q96BP2 118 aaKnown RBP5.68□□□□□ -1.5
NPHP3-204ENST00000469232 PACRGQ96M98 296 aaPredicted RBP5.68□□□□□ -1.5
NPHP3-204ENST00000469232 PRADC1Q9BSG0 188 aa5.68□□□□□ -1.5
NPHP3-204ENST00000469232 C5orf52A6NGY3 159 aa5.67□□□□□ -1.5
NPHP3-204ENST00000469232 TCAPO15273 167 aa5.67□□□□□ -1.5
NPHP3-204ENST00000469232 PMCHP20382 165 aa5.67□□□□□ -1.5
NPHP3-204ENST00000469232 IFI27P40305 119 aaPredicted RBP5.67□□□□□ -1.5
NPHP3-204ENST00000469232 RPL36AP83881 106 aaKnown RBP5.67□□□□□ -1.5
NPHP3-204ENST00000469232 IQCJQ1A5X6 159 aa5.67□□□□□ -1.5
NPHP3-204ENST00000469232 DAZ4Q86SG3 579 aaKnown RBP5.67□□□□□ -1.5
NPHP3-204ENST00000469232 NIT1Q86X76 327 aa5.67□□□□□ -1.5
NPHP3-204ENST00000469232 RPL36ALQ969Q0 106 aaKnown RBP5.67□□□□□ -1.5
NPHP3-204ENST00000469232 DAZ3Q9NR90 486 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms