RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 IGHV1-69DA0A0B4J2H0 117 aa10.06□□□□□ -0.8
SHANK2-214ENST00000468619 TRBV30A0A0K0K1B3 111 aa10.06□□□□□ -0.8
SHANK2-214ENST00000468619 UBE2E1P51965 193 aa10.06□□□□□ -0.8
SHANK2-214ENST00000468619 C15orf32Q32M92 178 aa10.06□□□□□ -0.8
SHANK2-214ENST00000468619 NPBQ8NG41 125 aa10.06□□□□□ -0.8
SHANK2-214ENST00000468619 NRGNQ92686 78 aa10.06□□□□□ -0.8
SHANK2-214ENST00000468619 MRPL23Q16540 153 aaKnown RBP10.05□□□□□ -0.8
SHANK2-214ENST00000468619 C9orf153Q5TBE3 101 aa10.05□□□□□ -0.8
SHANK2-214ENST00000468619 UBTD1Q9HAC8 227 aa10.05□□□□□ -0.8
SHANK2-214ENST00000468619 VPS13CQ709C8 3753 aa10.05□□□□□ -0.8
SHANK2-214ENST00000468619 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
SHANK2-214ENST00000468619 JPT2Q9H910 190 aa10.05□□□□□ -0.8
SHANK2-214ENST00000468619 DPM3Q9P2X0 92 aa10.05□□□□□ -0.8
SHANK2-214ENST00000468619 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
SHANK2-214ENST00000468619 NPC2P61916 151 aa10.04□□□□□ -0.8
SHANK2-214ENST00000468619 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
SHANK2-214ENST00000468619 LRRK2Q5S007 2527 aa10.04□□□□□ -0.8
SHANK2-214ENST00000468619 ICOSQ9Y6W8 199 aa10.04□□□□□ -0.8
SHANK2-214ENST00000468619 FAM208BQ5VWN6 2430 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 TRBV7-7A0A0K0K1E9 115 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 LEPROTO15243 131 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 CLEC19AQ6UXS0 136 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 TMEM141Q96I45 108 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 LINC01600Q96MT4 127 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 F5H697 171 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 M0R2P5 195 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 C11orf71Q6IPW1 123 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 DNAJC30Q96LL9 226 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 MUC4Q99102 2169 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 A0A087WWL8 130 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 EBI3Q14213 229 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 C20orf173Q96LM9 149 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 TIMM17AQ99595 171 aa10.03□□□□□ -0.8
SHANK2-214ENST00000468619 ZNF256Q9Y2P7 627 aaPredicted RBP10.03□□□□□ -0.8
SHANK2-214ENST00000468619 PPP1R17O96001 155 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 RNASE4P34096 147 aaKnown RBP10.02□□□□□ -0.81
SHANK2-214ENST00000468619 ECSCRQ19T08 205 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 METTL26Q96S19 204 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 SDHAF1A6NFY7 115 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 H3BT86 120 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 POLR2KP53803 58 aaKnown RBP10.02□□□□□ -0.81
SHANK2-214ENST00000468619 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
SHANK2-214ENST00000468619 TRAV8-3A0A0A6YYJ7 113 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 NDUFA7O95182 113 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
SHANK2-214ENST00000468619 HERVK_113P63121 156 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 POM121L12Q8N7R1 296 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 FAM240AA0A1B0GVK7 77 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 VCYO14598 125 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 NPFFO15130 113 aa10.01□□□□□ -0.81
SHANK2-214ENST00000468619 CSMD2Q7Z408 3487 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 COX6CP09669 75 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 LINC00315P59091 139 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 SUMO4Q6EEV6 95 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 A0A0J9YXV3 536 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 SPXQ9BT56 116 aa10□□□□□ -0.81
SHANK2-214ENST00000468619 IGHV7-81A0A0B4J1V7 117 aa9.99□□□□□ -0.81
SHANK2-214ENST00000468619 C5orf47Q569G3 176 aa9.99□□□□□ -0.81
SHANK2-214ENST00000468619 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
SHANK2-214ENST00000468619 CENPEQ02224 2701 aa9.99□□□□□ -0.81
SHANK2-214ENST00000468619 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
SHANK2-214ENST00000468619 MRPL53Q96EL3 112 aaKnown RBP9.99□□□□□ -0.81
SHANK2-214ENST00000468619 F6UB75 175 aa9.98□□□□□ -0.81
SHANK2-214ENST00000468619 FAM74A4Q5TZK3 123 aa9.98□□□□□ -0.81
SHANK2-214ENST00000468619 CCDC140Q96MF4 163 aa9.98□□□□□ -0.81
SHANK2-214ENST00000468619 KIF25-AS1Q9Y6Z4 181 aa9.98□□□□□ -0.81
SHANK2-214ENST00000468619 PRRC2AP48634 2157 aaKnown RBP9.98□□□□□ -0.81
SHANK2-214ENST00000468619 FAM19A5Q7Z5A7 132 aaPredicted RBP9.98□□□□□ -0.81
SHANK2-214ENST00000468619 TENM4Q6N022 2769 aa9.98□□□□□ -0.81
SHANK2-214ENST00000468619 IGHV4OR15-8A0A075B7B6 117 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 A0A087WW49 117 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 I3L3M4 83 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 LST1O00453 97 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 VMO1Q7Z5L0 202 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 DUX5Q96PT3 197 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 DEFB121Q5J5C9 76 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 LITAFQ99732 161 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 CELSR2Q9HCU4 2923 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 IGKV3-7A0A075B6H7 116 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 SMIM9A6NGZ8 99 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
SHANK2-214ENST00000468619 LINC00477Q96M19 166 aa9.96□□□□□ -0.81
SHANK2-214ENST00000468619 SPG11Q96JI7 2443 aa9.96□□□□□ -0.82
SHANK2-214ENST00000468619 G3V318 75 aa9.96□□□□□ -0.82
SHANK2-214ENST00000468619 UQCRQO14949 82 aa9.96□□□□□ -0.82
SHANK2-214ENST00000468619 MAP1AP78559 2803 aaPredicted RBP9.96□□□□□ -0.82
SHANK2-214ENST00000468619 NBPF19A0A087WUL8 3843 aa9.95□□□□□ -0.82
SHANK2-214ENST00000468619 TRAV41A0A0B4J266 112 aa9.95□□□□□ -0.82
SHANK2-214ENST00000468619 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
SHANK2-214ENST00000468619 LENEPQ9Y5L5 61 aa9.95□□□□□ -0.82
SHANK2-214ENST00000468619 TRAV12-3A0A0B4J271 114 aa9.95□□□□□ -0.82
SHANK2-214ENST00000468619 A8MZ25 164 aa9.95□□□□□ -0.82
SHANK2-214ENST00000468619 LINC00526Q96FQ7 95 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms