RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 RPL13AP40429 203 aaKnown RBP6.61□□□□□ -1.35
NEDD9-207ENST00000468612 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
NEDD9-207ENST00000468612 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
NEDD9-207ENST00000468612 ZNF56Q15929 161 aa6.61□□□□□ -1.35
NEDD9-207ENST00000468612 AQP10Q96PS8 301 aa6.61□□□□□ -1.35
NEDD9-207ENST00000468612 NAP1L6A6NFF2 107 aa6.6□□□□□ -1.35
NEDD9-207ENST00000468612 M0R036 132 aa6.6□□□□□ -1.35
NEDD9-207ENST00000468612 BTCP35070 178 aa6.6□□□□□ -1.35
NEDD9-207ENST00000468612 AMTP48728 403 aa6.6□□□□□ -1.35
NEDD9-207ENST00000468612 UBE2D1P51668 147 aa6.6□□□□□ -1.35
NEDD9-207ENST00000468612 LINC01547P58512 204 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-207ENST00000468612 TSPAN13O95857 204 aa6.59□□□□□ -1.35
NEDD9-207ENST00000468612 SULT1A2P50226 295 aa6.59□□□□□ -1.35
NEDD9-207ENST00000468612 CRIP1P50238 77 aa6.59□□□□□ -1.35
NEDD9-207ENST00000468612 CARD19Q96LW7 228 aa6.59□□□□□ -1.35
NEDD9-207ENST00000468612 EPDR1Q9UM22 224 aa6.59□□□□□ -1.35
NEDD9-207ENST00000468612 ARL2-SNX15V9GYD0 113 aa6.59□□□□□ -1.35
NEDD9-207ENST00000468612 TMBIM6P55061 237 aa6.58□□□□□ -1.36
NEDD9-207ENST00000468612 TRAV34A0A0B4J273 112 aa6.57□□□□□ -1.36
NEDD9-207ENST00000468612 H3BMQ9 156 aa6.57□□□□□ -1.36
NEDD9-207ENST00000468612 CYCSP99999 105 aaKnown RBP6.57□□□□□ -1.36
NEDD9-207ENST00000468612 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
NEDD9-207ENST00000468612 CHCHD10Q8WYQ3 142 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-207ENST00000468612 LINC00526Q96FQ7 95 aa6.57□□□□□ -1.36
NEDD9-207ENST00000468612 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
NEDD9-207ENST00000468612 RBM38Q9H0Z9 239 aaKnown RBP6.57□□□□□ -1.36
NEDD9-207ENST00000468612 HMGB3O15347 200 aaKnown RBP6.56□□□□□ -1.36
NEDD9-207ENST00000468612 SH2D1AO60880 128 aa6.56□□□□□ -1.36
NEDD9-207ENST00000468612 ARL14EPLP0DKL9 152 aa6.56□□□□□ -1.36
NEDD9-207ENST00000468612 SUMO1P63165 101 aaKnown RBP6.56□□□□□ -1.36
NEDD9-207ENST00000468612 GAGE2BQ13066 116 aa6.56□□□□□ -1.36
NEDD9-207ENST00000468612 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
NEDD9-207ENST00000468612 C9orf116Q5BN46 136 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-207ENST00000468612 CARHSP1Q9Y2V2 147 aaKnown RBP6.56□□□□□ -1.36
NEDD9-207ENST00000468612 TMSB15BA0A087X1C1 80 aa6.55□□□□□ -1.36
NEDD9-207ENST00000468612 A0A1W2PPV4 95 aa6.55□□□□□ -1.36
NEDD9-207ENST00000468612 FOXI1Q12951 378 aa6.55□□□□□ -1.36
NEDD9-207ENST00000468612 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
NEDD9-207ENST00000468612 CDIP1Q9H305 208 aa6.55□□□□□ -1.36
NEDD9-207ENST00000468612 IGKV3OR2-268A0A0C4DH90 116 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 LOC107984640A0A0U1RRK4 108 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 F5H697 171 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 SYCNQ0VAF6 134 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 CNPY1Q3B7I2 92 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 FAM162BQ5T6X4 162 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 Q86TA4 180 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 SEC22CQ9BRL7 303 aa6.54□□□□□ -1.36
NEDD9-207ENST00000468612 SSBP4Q9BWG4 385 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-207ENST00000468612 STAG3L2P0CL84 134 aa6.53□□□□□ -1.36
NEDD9-207ENST00000468612 STAG3L3P0CL85 134 aa6.53□□□□□ -1.36
NEDD9-207ENST00000468612 GCHFRP30047 84 aa6.53□□□□□ -1.36
NEDD9-207ENST00000468612 EIF5AP63241 154 aaKnown RBP6.53□□□□□ -1.36
NEDD9-207ENST00000468612 SDHCQ99643 169 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-207ENST00000468612 MED28Q9H204 178 aa6.53□□□□□ -1.36
NEDD9-207ENST00000468612 IGHV1-58A0A0C4DH39 117 aa6.52□□□□□ -1.37
NEDD9-207ENST00000468612 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-207ENST00000468612 H0YIZ8 118 aa6.52□□□□□ -1.37
NEDD9-207ENST00000468612 RPL12P30050 165 aaKnown RBP6.52□□□□□ -1.37
NEDD9-207ENST00000468612 ZNF674Q2M3X9 581 aa6.52□□□□□ -1.37
NEDD9-207ENST00000468612 MLST8Q9BVC4 326 aa6.52□□□□□ -1.37
NEDD9-207ENST00000468612 A0A087WZ39 114 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 M0QY20 66 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 UBE2L6O14933 153 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 FGF6P10767 208 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 TRIQKQ629K1 86 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 SCGB1C1Q8TD33 95 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 PGLYRP4Q96LB8 373 aa6.51□□□□□ -1.37
NEDD9-207ENST00000468612 ZNF471Q9BX82 626 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-207ENST00000468612 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
NEDD9-207ENST00000468612 CENPXA8MT69 81 aa6.5□□□□□ -1.37
NEDD9-207ENST00000468612 BCL2P10415 239 aa6.5□□□□□ -1.37
NEDD9-207ENST00000468612 CDC34P49427 236 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-207ENST00000468612 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-207ENST00000468612 SNAI2O43623 268 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 CRYGAP11844 174 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 CAMPP49913 170 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 MEF2BQ02080 365 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-207ENST00000468612 RAB24Q969Q5 203 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 TMEM167BQ9NRX6 74 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 ZFP30Q9Y2G7 519 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 HSPB11Q9Y547 144 aa6.49□□□□□ -1.37
NEDD9-207ENST00000468612 MUC21A0A140T8X8 626 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 A0A1W2PRE2 83 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 A6NHS1 94 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 ZNF561-AS1K7EIQ3 104 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 PEX7O00628 323 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 APOMO95445 188 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 CXCL1P09341 107 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 NKX2-5P52952 324 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-207ENST00000468612 NUP35Q8NFH5 326 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
NEDD9-207ENST00000468612 OR5AL1P0C617 328 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 SMIM17P0DL12 118 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 S100A5P33763 92 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 XCL1P47992 114 aa6.47□□□□□ -1.37
NEDD9-207ENST00000468612 LRRC37A5PQ49AS3 106 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms